Yersinia enterocolitica subsp. enterocolitica 8081

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia enterocolitica subsp. enterocolitica 8081 is a pathogenic bacterium notable for its role in foodborne illnesses. As a Gram-negative rod, it exhibits a single-cell arrangement and possesses flagella, which grants it mobility. This organism is classified as a facultative anaerobe, allowing it to thrive in both the presence and absence of oxygen. It is heterotrophic, deriving its energy from organic compounds, and prefers an optimal growth temperature of 28°C, fitting within the mesophilic range. Yersinia enterocolitica 8081 is nonsporulating and has a relatively simple genomic structure with only one replicon. Its biotic relationship is categorized as free-living, indicating that it can survive independently in various environments. The presence of two membranes is characteristic of its Gram-negative classification and contributes to its pathogenicity. This bacterium's ability to thrive in multiple habitats suggests ecological versatility, which may facilitate its transmission through diverse environmental sources. Understanding the traits of Yersinia enterocolitica subsp. enterocolitica 8081 can provide insights into its survival strategies and pathogenic mechanisms, particularly in relation to its adaptation to varying conditions. The accession number NC_008791.1 provides a reference for further genomic studies, potentially aiding in the development of targeted interventions for controlling infections caused by this organism.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia enterocolitica
Strain8081

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Yersinia enterocolitica subsp. enterocolitica 8081
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityYes

Genome Summary

Yersinia enterocolitica subsp. enterocolitica 8081


Gene Summary

Adenine Count

19032 bp

Thymine Count

18945 bp

Guanine Count

14945 bp

Cytosine Count

14799 bp

Genome Length

67721 bp

Protein-coding Genes

72 genes

Non-Coding Genes

20 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive38269 - 38281Not Available
Transposase insfYE_RS21375Not AvailableNegative39747 - 4019617034.5
group ii intron maturase-specific domain-containing proteinYE_RS21380Not AvailableNegative40240 - 4078821305.8
is3 family transposaseYE_RS21385Not AvailableNegative40788 - 409436393.77
type ii toxin-antitoxin system rele/pare family toxinYE_RS21390Not AvailableNegative41132 - 4143411825.1
type ii toxin-antitoxin system pard family antitoxinYE_RS21395Not AvailableNegative41427 - 416698856.72
Transposase is26YE_RS21400Not AvailableNegative41835 - 4212711469.1
AttlNot AvailableNot AvailablePositive42144 - 42156Not Available
Dna polymeraseYE_RS21640Not AvailablePositive42212 - 423856450.66
hypothetical proteinYE_RS21405Not AvailableNegative42535 - 427718483.31

Displaying genes 1 – 10 of 92 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2239 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da

Displaying 1–10 of 2239 metabolites

Health Effects

No health effects information available for this bacterium.