Marinobacter nauticus VT8

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Marinobacteraceae

Genus

Marinobacter

Description

Marinobacter nauticus VT8 is a Gram-negative bacterium characterized by the presence of flagella, which contributes to its motility. This species possesses two replicons, indicating a complex genomic structure that may facilitate its adaptability in various environments. The genomic sequences of Marinobacter nauticus VT8 are available under the accessions NC_008739.1 and NC_008740.1, which provide valuable resources for further research into its genetic makeup. The presence of flagella in Marinobacter nauticus VT8 suggests that it may exhibit active movement in aquatic environments, which is typical for many marine bacteria. This motility can play a significant role in its ecological interactions, such as nutrient acquisition and colonization of surfaces. Furthermore, the dual-replicon structure may allow for greater genetic diversity and resilience, enabling the organism to thrive in diverse marine habitats. Overall, Marinobacter nauticus VT8 exemplifies the adaptations of marine bacteria to their environments, particularly through its motility and genetic organization. Understanding these traits can provide insights into the ecological roles of such microorganisms in marine ecosystems, including their contributions to nutrient cycling and interactions with other microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyMarinobacteraceae
GenusMarinobacter
SpeciesMarinobacter nauticus
StrainVT8

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatoil-polluted water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinobacter nauticus VT8


Gene Summary

Adenine Count

934854 bp

Thymine Count

913916 bp

Guanine Count

1220007 bp

Cytosine Count

1258072 bp

Genome Length

4326849 bp

Protein-coding Genes

3952 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cynx/nimt family mfs transporterMAQU_RS00410Not AvailableNegative99221 - 10042342620.2
ectoine synthaseMAQU_RS00415Not AvailableNegative100435 - 10083014636.3
gtpase/duf3482 domain-containing proteinMAQU_RS00420Not AvailableNegative100881 - 10231153771.3
duf2868 domain-containing proteinMAQU_RS00425Not AvailableNegative102308 - 10372052164.2
duf6164 family proteinMAQU_RS00430Not AvailablePositive103808 - 10417013674.3
3-hydroxybutyrate oligomer hydrolase family proteinMAQU_RS00435Not AvailablePositive104424 - 10652674226.5
sigma-54 interaction domain-containing proteinMAQU_RS00440Not AvailablePositive106629 - 10807452243.3
trap transporter substrate-binding proteinMAQU_RS00445Not AvailablePositive108387 - 10943938428.9
trap transporter small permease subunitMAQU_RS00450Not AvailablePositive109554 - 11019223193.2
trap transporter large permeaseMAQU_RS00455Not AvailablePositive110192 - 11155648172.9

Displaying genes 81 – 90 of 4233 in total

Metabolites

1732 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1732 metabolites

Health Effects

No health effects information available for this bacterium.