Marinobacter nauticus VT8

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Marinobacteraceae

Genus

Marinobacter

Description

Marinobacter nauticus VT8 is a Gram-negative bacterium characterized by the presence of flagella, which contributes to its motility. This species possesses two replicons, indicating a complex genomic structure that may facilitate its adaptability in various environments. The genomic sequences of Marinobacter nauticus VT8 are available under the accessions NC_008739.1 and NC_008740.1, which provide valuable resources for further research into its genetic makeup. The presence of flagella in Marinobacter nauticus VT8 suggests that it may exhibit active movement in aquatic environments, which is typical for many marine bacteria. This motility can play a significant role in its ecological interactions, such as nutrient acquisition and colonization of surfaces. Furthermore, the dual-replicon structure may allow for greater genetic diversity and resilience, enabling the organism to thrive in diverse marine habitats. Overall, Marinobacter nauticus VT8 exemplifies the adaptations of marine bacteria to their environments, particularly through its motility and genetic organization. Understanding these traits can provide insights into the ecological roles of such microorganisms in marine ecosystems, including their contributions to nutrient cycling and interactions with other microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyMarinobacteraceae
GenusMarinobacter
SpeciesMarinobacter nauticus
StrainVT8

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatoil-polluted water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinobacter nauticus VT8, complete sequence.

Gene Summary

Adenine Count

934854 bp

Thymine Count

913916 bp

Guanine Count

1220007 bp

Cytosine Count

1258072 bp

Genome Length

4326849 bp

Protein-coding Genes

3952 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleoside 2-deoxyribosyltransferaseMAQU_RS15180Not AvailablePositive3302879 - 330343920816.6
ankyrin repeat domain-containing proteinMAQU_RS15185Not AvailableNegative3303440 - 330406623459.1
type vii toxin-antitoxin system hept family rnase toxinMAQU_RS22520Not AvailableNegative3304243 - 33044076268.54
type vii toxin-antitoxin system mnta family adenylyltransferase antitoxinMAQU_RS15190Not AvailableNegative3304424 - 330482214755.7
aaa family atpaseMAQU_RS15195Not AvailablePositive3305094 - 330627543129.4
tigr00730 family rossman fold proteinMAQU_RS15200Not AvailablePositive3306568 - 330712820390.5
hypothetical proteinMAQU_RS15205Not AvailableNegative3307363 - 330766511072.7
thioredoxin trxcMAQU_RS15210Not AvailableNegative3307693 - 330813316212.5
bestrophin family ion channelMAQU_RS15215Not AvailablePositive3308678 - 330908515087.7
thiol-disulfide oxidoreductase dcc family proteinMAQU_RS15220Not AvailableNegative3309097 - 330947414366.4

Displaying genes 3071 – 3080 of 4233 in total

Metabolites

1732 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1732 metabolites

Health Effects

No health effects information available for this bacterium.