Marinobacter nauticus VT8

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Marinobacteraceae

Genus

Marinobacter

Description

Marinobacter nauticus VT8 is a Gram-negative bacterium characterized by its marine origin and distinct physiological traits. As a member of the genus Marinobacter, this microbe is adapted to thrive in saline environments, which is reflective of its ecological niche in oceanic waters. The Gram-negative nature of Marinobacter nauticus VT8 suggests a complex cell envelope structure, including an outer membrane that may contribute to its survival in harsh marine conditions. This bacterium is noteworthy for its potential to metabolize a variety of organic compounds, which positions it as an interesting candidate for studies related to biodegradation and bioremediation in marine ecosystems. The presence of diverse metabolic pathways could allow Marinobacter nauticus VT8 to utilize various substrates, thereby playing a role in nutrient cycling within its habitat. Furthermore, the adaptability of Marinobacter nauticus VT8 to high-salinity environments may provide insights into the evolutionary mechanisms that facilitate microbial life in extreme conditions. Its ability to thrive in such niches underscores the importance of marine microbes in global biogeochemical processes and their potential applications in environmental biotechnology. Overall, Marinobacter nauticus VT8 exemplifies the rich diversity of microbial life in the ocean and highlights the necessity for further research into its ecological roles and functional capabilities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyMarinobacteraceae
GenusMarinobacter
SpeciesMarinobacter nauticus
StrainVT8

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinobacter nauticus VT8


Gene Summary

Adenine Count

934854 bp

Thymine Count

913916 bp

Guanine Count

1220007 bp

Cytosine Count

1258072 bp

Genome Length

4326849 bp

Protein-coding Genes

3952 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiator protein dnaaMAQU_RS00005Not Available+466 - 192955369.5
dna polymerase iii subunit betaMAQU_RS00010Not Available+1990 - 309340485.6
abc1 kinase family proteinMAQU_RS00015Not Available+3112 - 438348110.1
dna replication/repair protein recfMAQU_RS00020Not Available+4487 - 560842237.6
dna topoisomerase (atp-hydrolyzing) subunit bMAQU_RS00025Not Available+5676 - 809089666.6
vc0807 family proteinMAQU_RS00030Not Available-8193 - 896028542.3
aspartate aminotransferase family proteinMAQU_RS00035Not Available-9067 - 1034445841.4
abc transporter transmembrane domain-containing proteinMAQU_RS00040Not Available-10433 - 1220563908.6
abcb family abc transporter atp-binding protein/permeaseMAQU_RS00045Not Available+12432 - 1422566966.0
exodeoxyribonuclease v subunit alphaMAQU_RS00050Not Available-14235 - 1648780943.2

Displaying genes 1 – 10 of 4233 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1732 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1732 metabolites