Pyrobaculum islandicum DSM 4184

BacilliNon-motileAnaerobic

Kingdom

Thermoproteati

Phylum

Thermoproteota

Class

Thermoprotei

Order

Thermoproteales

Family

Thermoproteaceae

Genus

Pyrobaculum

Description

Pyrobaculum islandicum DSM 4184 is a thermophilic, free-living bacterium characterized by its bacilli shape and anaerobic oxygen requirement. It thrives optimally at a temperature of 100°C and falls within a thermophilic temperature range. This organism has a single replicon and a single membrane, which is consistent with its classification as a member of the Archaea domain. Despite its flagella presence, Pyrobaculum islandicum exhibits no mobility, suggesting a sedentary lifestyle within its specialized habitat. It is nonsporulating and does not display pathogenicity, indicating that it does not cause disease in other organisms. The strain is cataloged under the accession number NC_008701.1, providing a genomic reference for further research. The ecological significance of Pyrobaculum islandicum lies in its ability to thrive in extreme environments, such as hydrothermal vents or hot springs, where it likely plays a role in biogeochemical cycling. Its anaerobic metabolism may contribute to the breakdown of organic materials in high-temperature ecosystems, aiding in nutrient recycling. Understanding the characteristics and ecological functions of such extremophiles is crucial for insights into microbial life in extreme conditions and their potential applications in biotechnology and environmental management.

Taxonomy

KingdomThermoproteati
PhylumThermoproteota
ClassThermoprotei
OrderThermoproteales
FamilyThermoproteaceae
GenusPyrobaculum
SpeciesPyrobaculum islandicum
StrainDSM 4184

Profile

Physiology
Gram staining propertiesNa
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature100
Temperature rangeThermophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Pyrobaculum islandicum DSM 4184, complete sequence.

Gene Summary

Adenine Count

460654 bp

Thymine Count

459870 bp

Guanine Count

453771 bp

Cytosine Count

452107 bp

Genome Length

1826402 bp

Protein-coding Genes

2145 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lyse family transporterPISL_RS09545Not AvailablePositive1683661 - 168427522146.7
duf72 domain-containing proteinPISL_RS09550Not AvailableNegative1684255 - 168495027103.5
hypothetical proteinPISL_RS11595Not AvailablePositive1685158 - 16852834730.82
Trna-pseudoNot AvailableNot AvailablePositive1685430 - 1685497Not Available
peroxiredoxinPISL_RS09555A8A9P0Positive1685600 - 168623824447.6
duf429 domain-containing proteinPISL_RS09560Not AvailablePositive1686267 - 168676717779.2
d-proline dehydrogenasePISL_RS09565A1RVM8Negative1686764 - 168785540343.7
abc transporter substrate-binding proteinPISL_RS09570Not AvailablePositive1687891 - 168876931954.9
30s ribosomal protein s14PISL_RS09575Q8ZVW1Positive1688800 - 16889646472.1
30s ribosomal protein s8PISL_RS09580A1RVN1Positive1689073 - 168946514928.7

Displaying genes 2011 – 2020 of 2186 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

157 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000590phloretateC9H9O3Chemical structure of phloretateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0000976enol-oxaloacetateC4H2O5Chemical structure of enol-oxaloacetateNot available
Average130.056Da
Monoisotopic129.9913203Da

Displaying 1–10 of 157 metabolites

Health Effects

No health effects information available for this bacterium.