Pediococcus pentosaceus ATCC 25745

Gram-positiveCocciNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Pediococcus

Description

Pediococcus pentosaceus ATCC 25745 is a Gram-positive, non-motile coccus that typically arranges itself in tetrads. This organism is a facultative anaerobe, meaning it can survive in both the presence and absence of oxygen. It thrives optimally at a temperature of 30°C, placing it within the mesophilic temperature range. This species does not produce spores, which is characteristic of nonsporulating bacteria. It possesses a single membrane and has one replicon, indicating a relatively simple genomic structure. P. pentosaceus ATCC 25745 is classified as free-living and is not known to exhibit pathogenicity. Its interactions primarily involve hosts from the Viridiplantae kingdom, suggesting a potential role in plant-associated microbiomes. The presence of flagella is noted in this species, although it is non-motile, indicating that the flagella may not contribute to movement. The ecological role of P. pentosaceus ATCC 25745 could be significant in fermentative processes, particularly in plant-based environments where it may contribute to the fermentation of plant substrates. Its ability to thrive in diverse habitats and its non-pathogenic nature suggest that it could be utilized in various applications, such as food fermentation or as a probiotic in agricultural contexts. Understanding its specific interactions within plant ecosystems can provide insights into its ecological significance and potential benefits in biotechnological applications.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusPediococcus
SpeciesPediococcus pentosaceus
StrainATCC 25745

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Pediococcus pentosaceus ATCC 25745
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Viridiplantae
Cell arrangementTetrads
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Pediococcus pentosaceus ATCC 25745


Gene Summary

Adenine Count

573424 bp

Thymine Count

574423 bp

Guanine Count

342399 bp

Cytosine Count

342141 bp

Genome Length

1832387 bp

Protein-coding Genes

1667 genes

Non-Coding Genes

158 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinPEPE_RS03905Not AvailablePositive816137 - 81673923103.8
HolinPEPE_RS03910Not AvailablePositive816782 - 81718314855.6
LysbPEPE_RS03915Not AvailablePositive817167 - 81848348183.4
AttrNot AvailableNot AvailablePositive818728 - 818752Not Available
Trna-arg;Not AvailableNot AvailablePositive818739 - 818812Not Available
hypothetical proteinPEPE_RS03925Not AvailablePositive819017 - 81952919293.6
tetr/acrr family transcriptional regulatorPEPE_RS03930Not AvailablePositive819863 - 82049223772.4
50s ribosomal protein l21PEPE_RS03935Not AvailablePositive820622 - 82093011130.5
Hypothetical proteinPEPE_RS03940Not AvailablePositive820952 - 82127811953.2
AttlNot AvailableNot AvailablePositive978338 - 978351Not Available

Displaying genes 61 – 70 of 1825 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1582 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da

Displaying 1–10 of 1582 metabolites

Health Effects

No health effects information available for this bacterium.