Pseudomonas aeruginosa UCBPP-PA14

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas aeruginosa UCBPP-PA14 is a Gram-negative, rod-shaped bacterium that serves as a significant model organism in microbiological studies. This microorganism is classified as a heterotroph, meaning it derives its energy from organic compounds. P. aeruginosa is an aerobic organism, requiring oxygen for its metabolic processes, and it typically thrives at an optimal temperature of 25°C, falling within the mesophilic temperature range. This bacterium is motile, possessing flagella that enable movement, and it exists in a single-cell arrangement. Pseudomonas aeruginosa UCBPP-PA14 is notable for its pathogenicity, being capable of causing disease in various hosts, which underscores its relevance in medical microbiology. It is a free-living organism, indicating that it can survive independently in various habitats. Pseudomonas aeruginosa UCBPP-PA14 has a unique genetic structure, characterized by a single replicon and a double-membrane system. The presence of two membranes is a hallmark of Gram-negative bacteria, contributing to its structural integrity and influencing its interactions with the environment. Ecologically, Pseudomonas aeruginosa plays a dual role; while it can be pathogenic, it also participates in various biogeochemical cycles and can thrive in diverse environments. Its adaptability and metabolic versatility allow it to occupy multiple habitats, highlighting its ecological significance beyond its role as a pathogen. The accession number for this strain is NC_008463.1, which can be used for further genetic and genomic studies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas aeruginosa
StrainUCBPP-PA14

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas aeruginosa UCBPP-PA14
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityYes

Genome Summary

Pseudomonas aeruginosa UCBPP-PA14, complete sequence.

Gene Summary

Adenine Count

1102316 bp

Thymine Count

1101370 bp

Guanine Count

2166587 bp

Cytosine Count

2167364 bp

Genome Length

6537648 bp

Protein-coding Genes

5904 genes

Non-Coding Genes

138 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gfa family proteinPA14_RS11790Not AvailableNegative2503775 - 250416714600.1
voc family proteinPA14_RS11795Not AvailableNegative2504199 - 250467817356.4
sigma-70 family rna polymerase sigma factorPA14_RS11800Not AvailablePositive2504847 - 250538619794.9
fecr domain-containing proteinPA14_RS11805Not AvailablePositive2505389 - 250632434829.7
duf6348 family proteinPA14_RS11810Not AvailablePositive2506753 - 250739123775.1
type 1 glutamine amidotransferase domain-containing proteinPA14_RS11815Not AvailableNegative2507551 - 250823725061.8
merr family transcriptional regulatorPA14_RS11820Not AvailableNegative2508337 - 250882517980.4
alpha/beta fold hydrolasePA14_RS11825Not AvailablePositive2509058 - 250988830448.9
nadh:flavin oxidoreductase/nadh oxidase family proteinPA14_RS11830Not AvailablePositive2510015 - 251125044691.0
ferredoxin fdxaPA14_RS11835Not AvailableNegative2511265 - 251160312478.8

Displaying genes 2391 – 2400 of 6042 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1203 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 1203 metabolites

Health Effects

No health effects information available for this bacterium.