Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella frigidimarina |
| Strain | NCBM4000 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs- Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1414471 bp
Thymine Count
1415931 bp
Guanine Count
1008876 bp
Cytosine Count
1005979 bp
Genome Length
4845257 bp
Protein-coding Genes
4022 genes
Non-Coding Genes
158 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | SFRI_RS00085 | Not Available | Positive | 22606 - 23136 | 20204.4 |
| arsr/smtb family transcription factor | SFRI_RS00090 | Not Available | Negative | 23262 - 23567 | 11505.0 |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | SFRI_RS00095 | Not Available | Positive | 23766 - 24311 | 20615.7 |
| trkh family potassium uptake protein | SFRI_RS00100 | Not Available | Negative | 24403 - 25845 | 53556.4 |
| trk system potassium transporter trka | SFRI_RS00105 | Not Available | Negative | 25852 - 27261 | 51338.1 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | SFRI_RS00110 | Not Available | Negative | 27278 - 28561 | 47617.0 |
| methionyl-trna formyltransferase | SFRI_RS00115 | Not Available | Negative | 28563 - 29519 | 34709.8 |
| peptide deformylase | SFRI_RS00120 | Not Available | Negative | 29528 - 30040 | 19378.5 |
| lysm peptidoglycan-binding domain-containing protein | SFRI_RS00125 | Not Available | Positive | 30167 - 31273 | 40765.2 |
| dna-processing protein dpra | SFRI_RS00130 | Not Available | Positive | 31357 - 32373 | 36464.8 |
Pathways
1432 pathways
Health Effects
No health effects information available for this bacterium.
