Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella frigidimarina |
| Strain | NCBM4000 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs- Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1414471 bp
Thymine Count
1415931 bp
Guanine Count
1008876 bp
Cytosine Count
1005979 bp
Genome Length
4845257 bp
Protein-coding Genes
4022 genes
Non-Coding Genes
158 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 4a pilus biogenesis protein pilo | SFRI_RS01930 | Not Available | Positive | 402987 - 403604 | 23491.2 |
| pilus assembly protein pilp | SFRI_RS01935 | Not Available | Positive | 403604 - 404122 | 19478.6 |
| type iv pilus secretin pilq | SFRI_RS01940 | Not Available | Positive | 404144 - 406192 | 74479.9 |
| shikimate kinase arok | SFRI_RS01945 | Not Available | Positive | 406639 - 407154 | 19225.9 |
| 3-dehydroquinate synthase | SFRI_RS01950 | Not Available | Positive | 407163 - 408239 | 39479.7 |
| atp-binding protein | SFRI_RS01955 | Not Available | Positive | 408290 - 409693 | 51556.3 |
| dam family site-specific dna-(adenine-n6)-methyltransferase | SFRI_RS01960 | Not Available | Positive | 409826 - 410662 | 31929.1 |
| duf2970 domain-containing protein | SFRI_RS01965 | Not Available | Negative | 410695 - 410874 | 6613.31 |
| hypothetical protein | SFRI_RS01970 | Not Available | Negative | 410874 - 411251 | 13569.1 |
| ribulose-phosphate 3-epimerase | SFRI_RS01975 | Not Available | Positive | 411523 - 412194 | 24151.3 |
Pathways
1432 pathways
Health Effects
No health effects information available for this bacterium.
