Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella frigidimarina |
| Strain | NCBM4000 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs- Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1414471 bp
Thymine Count
1415931 bp
Guanine Count
1008876 bp
Cytosine Count
1005979 bp
Genome Length
4845257 bp
Protein-coding Genes
4022 genes
Non-Coding Genes
158 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp endopeptidase proteolytic subunit clpp | SFRI_RS13310 | Not Available | Negative | 3105213 - 3105824 | 22164.9 |
| trigger factor | SFRI_RS13315 | Not Available | Negative | 3105915 - 3107219 | 47867.1 |
| Trna-his | Not Available | Not Available | Positive | 3107614 - 3107689 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 3107698 - 3107774 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 3107860 - 3107936 | Not Available |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | SFRI_RS13335 | Not Available | Positive | 3108228 - 3109082 | 30429.8 |
| cysteine--trna ligase | SFRI_RS13340 | Not Available | Negative | 3109182 - 3110564 | 52309.9 |
| peptidylprolyl isomerase | SFRI_RS13345 | Not Available | Positive | 3110708 - 3111202 | 17916.2 |
| udp-2,3-diacylglucosamine diphosphatase | SFRI_RS13350 | Not Available | Positive | 3111205 - 3111930 | 27369.0 |
| trna isopentenyl-2-thiomethyl-a-37 hydroxylase miae | SFRI_RS13355 | Not Available | Negative | 3111996 - 3112664 | 26038.2 |
Pathways
1432 pathways
Health Effects
No health effects information available for this bacterium.
