Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella frigidimarina |
| Strain | NCBM4000 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs- Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1414471 bp
Thymine Count
1415931 bp
Guanine Count
1008876 bp
Cytosine Count
1005979 bp
Genome Length
4845257 bp
Protein-coding Genes
4022 genes
Non-Coding Genes
158 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath large subunit | SFRI_RS12180 | Not Available | Negative | 2820658 - 2822151 | 55565.6 |
| type vi secretion system contractile sheath small subunit | SFRI_RS12185 | Not Available | Negative | 2822151 - 2822651 | 18873.7 |
| type vi secretion system protein tssa | SFRI_RS12190 | Not Available | Negative | 2822693 - 2823799 | 41581.6 |
| pp2c family protein-serine/threonine phosphatase | SFRI_RS12195 | Not Available | Negative | 2824086 - 2824853 | 28389.8 |
| type vi secretion system-associated protein tagf | SFRI_RS12200 | Not Available | Negative | 2824844 - 2825575 | 27846.6 |
| type vi secretion system membrane subunit tssm | SFRI_RS12205 | Not Available | Negative | 2825557 - 2829105 | 134006.0 |
| type vi secretion system protein tssl, long form | SFRI_RS12210 | Not Available | Negative | 2829129 - 2830418 | 48498.5 |
| type vi secretion system baseplate subunit tssk | SFRI_RS12215 | Not Available | Negative | 2830443 - 2831771 | 49375.3 |
| type vi secretion system lipoprotein tssj | SFRI_RS12220 | Not Available | Negative | 2831796 - 2832266 | 17447.8 |
| type vi secretion system-associated fha domain protein tagh | SFRI_RS12225 | Not Available | Negative | 2832285 - 2833640 | 50180.1 |
Pathways
1432 pathways
Health Effects
No health effects information available for this bacterium.
