Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella frigidimarina |
| Strain | NCBM4000 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs- Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1414471 bp
Thymine Count
1415931 bp
Guanine Count
1008876 bp
Cytosine Count
1005979 bp
Genome Length
4845257 bp
Protein-coding Genes
4022 genes
Non-Coding Genes
158 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| paar domain-containing protein | SFRI_RS12130 | Not Available | Negative | 2808850 - 2809140 | 9437.87 |
| hypothetical protein | SFRI_RS12135 | Not Available | Negative | 2809183 - 2809536 | 13274.0 |
| type vi secretion system tip protein vgrg | SFRI_RS12140 | Not Available | Negative | 2809539 - 2811395 | 68731.0 |
| hcp family type vi secretion system effector | SFRI_RS12145 | Not Available | Negative | 2811466 - 2811945 | 17622.8 |
| type vi secretion system atpase tssh | SFRI_RS12150 | Not Available | Negative | 2812315 - 2814921 | 95824.8 |
| type vi secretion system baseplate subunit tssg | SFRI_RS12155 | Not Available | Negative | 2814941 - 2815948 | 37545.7 |
| type vi secretion system baseplate subunit tssf | SFRI_RS12160 | Not Available | Negative | 2815945 - 2817774 | 69596.5 |
| type vi secretion system baseplate subunit tsse | SFRI_RS12165 | Not Available | Negative | 2817771 - 2818262 | 18897.7 |
| type vi secretion system accessory protein tagj | SFRI_RS12170 | Not Available | Negative | 2818268 - 2819056 | 29394.3 |
| type vi secretion system contractile sheath large subunit | SFRI_RS12175 | Not Available | Negative | 2819071 - 2820606 | 58247.7 |
Pathways
1432 pathways
Health Effects
No health effects information available for this bacterium.
