Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella frigidimarina |
| Strain | NCBM4000 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs- Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1414471 bp
Thymine Count
1415931 bp
Guanine Count
1008876 bp
Cytosine Count
1005979 bp
Genome Length
4845257 bp
Protein-coding Genes
4022 genes
Non-Coding Genes
158 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold shock domain-containing protein cspd | SFRI_RS11630 | Not Available | Positive | 2701641 - 2701847 | 7369.71 |
| nadp-dependent isocitrate dehydrogenase | SFRI_RS11635 | Not Available | Negative | 2702003 - 2704228 | 80283.7 |
| pseudouridine synthase | SFRI_RS11640 | Not Available | Positive | 2704610 - 2705317 | 26161.4 |
| nudix hydrolase | SFRI_RS11645 | Not Available | Positive | 2705350 - 2705823 | 17534.0 |
| trna 2-thiouridine(34) synthase mnma | SFRI_RS11650 | Not Available | Positive | 2706082 - 2707200 | 41337.9 |
| high frequency lysogenization protein hfld | SFRI_RS11655 | Not Available | Positive | 2707225 - 2707836 | 22529.2 |
| adenylosuccinate lyase | SFRI_RS11660 | Not Available | Positive | 2707876 - 2709246 | 51032.1 |
| cupin domain-containing protein | SFRI_RS11665 | Not Available | Positive | 2709340 - 2710482 | 42524.9 |
| duf4826 family protein | SFRI_RS11670 | Not Available | Negative | 2710628 - 2711068 | 16803.2 |
| glu/leu/phe/val dehydrogenase dimerization domain-containing protein | SFRI_RS11675 | Not Available | Positive | 2711353 - 2712384 | 36648.6 |
Pathways
1432 pathways
Health Effects
No health effects information available for this bacterium.
