Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella frigidimarina |
| Strain | NCBM4000 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs- Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1414471 bp
Thymine Count
1415931 bp
Guanine Count
1008876 bp
Cytosine Count
1005979 bp
Genome Length
4845257 bp
Protein-coding Genes
4022 genes
Non-Coding Genes
158 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease iii | SFRI_RS11230 | Not Available | Positive | 2605139 - 2605780 | 23941.9 |
| lactoylglutathione lyase | SFRI_RS11235 | Not Available | Positive | 2606159 - 2606569 | 14816.6 |
| holliday junction branch migration dna helicase ruvb | SFRI_RS11240 | Not Available | Negative | 2606748 - 2607758 | 37350.2 |
| holliday junction branch migration protein ruva | SFRI_RS11245 | Not Available | Negative | 2607789 - 2608406 | 22179.1 |
| crossover junction endodeoxyribonuclease ruvc | SFRI_RS11250 | Not Available | Negative | 2608403 - 2608924 | 18434.4 |
| yebc/pmpr family dna-binding transcriptional regulator | SFRI_RS11255 | Not Available | Negative | 2608932 - 2609684 | 26963.2 |
| aspartate--trna ligase | SFRI_RS11260 | Not Available | Negative | 2609808 - 2611583 | 65703.1 |
| diguanylate cyclase domain-containing protein | SFRI_RS11265 | Not Available | Negative | 2611755 - 2614580 | 106053.0 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | SFRI_RS11270 | Not Available | Positive | 2614968 - 2615699 | 27700.9 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | SFRI_RS11275 | Not Available | Positive | 2615696 - 2616688 | 37732.4 |
Pathways
1432 pathways
Health Effects
No health effects information available for this bacterium.
