Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella frigidimarina |
| Strain | NCBM4000 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs- Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1414471 bp
Thymine Count
1415931 bp
Guanine Count
1008876 bp
Cytosine Count
1005979 bp
Genome Length
4845257 bp
Protein-coding Genes
4022 genes
Non-Coding Genes
158 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel-dependent hydrogenase large subunit | SFRI_RS10825 | Not Available | Positive | 2504906 - 2506609 | 62466.0 |
| ni/fe-hydrogenase, b-type cytochrome subunit | SFRI_RS10830 | Not Available | Positive | 2506641 - 2507309 | 25448.5 |
| hyad/hybd family hydrogenase maturation endopeptidase | SFRI_RS10835 | Not Available | Positive | 2507325 - 2507879 | 20358.5 |
| hypothetical protein | SFRI_RS10840 | Not Available | Positive | 2507872 - 2509869 | 74324.6 |
| carbamoyltransferase hypf | SFRI_RS10845 | Not Available | Positive | 2509925 - 2512336 | 88869.0 |
| hydrogenase nickel incorporation protein hypb | SFRI_RS10850 | Not Available | Positive | 2512633 - 2513352 | 26724.7 |
| hypc/hybg/hupf family hydrogenase formation chaperone | SFRI_RS10855 | Not Available | Positive | 2513355 - 2513597 | 8937.78 |
| hydrogenase formation protein hypd | SFRI_RS10860 | Not Available | Positive | 2513594 - 2514721 | 41338.9 |
| hydrogenase expression/formation protein hype | SFRI_RS10865 | Not Available | Positive | 2514711 - 2515718 | 36080.5 |
| hydrogenase maturation nickel metallochaperone hypa | SFRI_RS10870 | Not Available | Positive | 2515718 - 2516062 | 12848.8 |
Pathways
1432 pathways
Health Effects
No health effects information available for this bacterium.
