Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella frigidimarina |
| Strain | NCBM4000 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs- Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1414471 bp
Thymine Count
1415931 bp
Guanine Count
1008876 bp
Cytosine Count
1005979 bp
Genome Length
4845257 bp
Protein-coding Genes
4022 genes
Non-Coding Genes
158 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-dependent thiol peroxidase | SFRI_RS09570 | Not Available | Negative | 2202841 - 2203308 | 16796.1 |
| glycine cleavage system protein r | SFRI_RS09575 | Not Available | Negative | 2203395 - 2203931 | 19669.1 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SFRI_RS09580 | Not Available | Positive | 2204215 - 2205099 | 31253.8 |
| outer membrane protein assembly factor bamc | SFRI_RS09585 | Not Available | Positive | 2205104 - 2206201 | 41662.2 |
| efflux rnd transporter periplasmic adaptor subunit | SFRI_RS09590 | Not Available | Positive | 2206738 - 2207820 | 39851.0 |
| transposase | SFRI_RS09595 | Not Available | Positive | 2207817 - 2210919 | 113355.0 |
| paai family thioesterase | SFRI_RS09600 | Not Available | Negative | 2211147 - 2211581 | 15131.7 |
| acyl-coa dehydrogenase fade | SFRI_RS09605 | Not Available | Negative | 2211665 - 2214112 | 89295.4 |
| class ii glutamine amidotransferase | SFRI_RS09610 | Not Available | Positive | 2214361 - 2215137 | 29029.4 |
| duf3108 domain-containing protein | SFRI_RS09615 | Not Available | Negative | 2215123 - 2216115 | 37266.3 |
Pathways
1432 pathways
Health Effects
No health effects information available for this bacterium.
