Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella frigidimarina |
| Strain | NCBM4000 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs- Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1414471 bp
Thymine Count
1415931 bp
Guanine Count
1008876 bp
Cytosine Count
1005979 bp
Genome Length
4845257 bp
Protein-coding Genes
4022 genes
Non-Coding Genes
158 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hd-gyp domain-containing protein | SFRI_RS09375 | Not Available | Negative | 2150912 - 2152129 | 45790.7 |
| doda-type extradiol aromatic ring-opening family dioxygenase | SFRI_RS09380 | Not Available | Negative | 2152471 - 2153256 | 29070.9 |
| lysr family transcriptional regulator | SFRI_RS09385 | Not Available | Negative | 2153334 - 2154221 | 33443.1 |
| pace efflux transporter | SFRI_RS09390 | Not Available | Positive | 2154308 - 2154733 | 16250.1 |
| hypothetical protein | SFRI_RS09395 | Not Available | Positive | 2154866 - 2155297 | 15813.8 |
| response regulator transcription factor | SFRI_RS09400 | Not Available | Positive | 2156065 - 2156715 | 24030.2 |
| pas domain-containing hybrid sensor histidine kinase/response regulator | SFRI_RS09405 | Not Available | Negative | 2156724 - 2160281 | 132778.0 |
| hypothetical protein | SFRI_RS21880 | Not Available | Positive | 2160473 - 2160787 | 11890.0 |
| dcap family trimeric outer membrane transporter | SFRI_RS09410 | Not Available | Positive | 2160741 - 2161514 | 28403.2 |
| abc transporter atp-binding protein | SFRI_RS09415 | Not Available | Positive | 2161654 - 2162463 | 30017.7 |
Pathways
1432 pathways
Health Effects
No health effects information available for this bacterium.
