Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella frigidimarina |
| Strain | NCBM4000 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs- Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1414471 bp
Thymine Count
1415931 bp
Guanine Count
1008876 bp
Cytosine Count
1005979 bp
Genome Length
4845257 bp
Protein-coding Genes
4022 genes
Non-Coding Genes
158 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | SFRI_RS07355 | Not Available | Positive | 1709270 - 1710349 | 39220.1 |
| efflux rnd transporter permease subunit | SFRI_RS07360 | Not Available | Positive | 1710353 - 1713418 | 112705.0 |
| 23s rrna pseudouridine(2605) synthase rlub | SFRI_RS07365 | Not Available | Positive | 1713690 - 1714562 | 32549.1 |
| hypothetical protein | SFRI_RS07370 | Not Available | Positive | 1714757 - 1715086 | 12119.3 |
| Trna-leu | Not Available | Not Available | Positive | 1715302 - 1715387 | Not Available |
| hu family dna-binding protein | SFRI_RS07380 | Not Available | Negative | 1715974 - 1716249 | 10156.4 |
| l,d-transpeptidase family protein | SFRI_RS07385 | Not Available | Positive | 1716601 - 1717962 | 52303.2 |
| duf882 domain-containing protein | SFRI_RS07390 | Not Available | Positive | 1718214 - 1718765 | 20558.7 |
| 50s ribosomal protein l25 | SFRI_RS07395 | Not Available | Positive | 1719245 - 1719532 | 10801.1 |
| translocation/assembly module tamb domain-containing protein | SFRI_RS07400 | Not Available | Negative | 1719680 - 1723594 | 142847.0 |
Pathways
1432 pathways
Health Effects
No health effects information available for this bacterium.
