Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella frigidimarina |
| Strain | NCBM4000 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs- Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1414471 bp
Thymine Count
1415931 bp
Guanine Count
1008876 bp
Cytosine Count
1005979 bp
Genome Length
4845257 bp
Protein-coding Genes
4022 genes
Non-Coding Genes
158 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SFRI_RS05425 | Not Available | Positive | 1242663 - 1243142 | 16874.3 |
| trna pseudouridine(13) synthase trud | SFRI_RS05430 | Not Available | Positive | 1243170 - 1244243 | 40152.0 |
| 5'/3'-nucleotidase sure | SFRI_RS05435 | Not Available | Positive | 1244247 - 1244996 | 26197.5 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SFRI_RS05440 | Not Available | Positive | 1244993 - 1245628 | 22964.0 |
| peptidoglycan dd-metalloendopeptidase family protein | SFRI_RS05445 | Not Available | Positive | 1245732 - 1246661 | 33674.1 |
| rna polymerase sigma factor rpos | SFRI_RS05450 | Not Available | Positive | 1246740 - 1247711 | 36795.0 |
| dna mismatch repair protein muts | SFRI_RS05455 | Not Available | Negative | 1248096 - 1250681 | 96527.0 |
| recombinase reca | SFRI_RS05460 | Not Available | Positive | 1250967 - 1252031 | 37769.4 |
| alanine--trna ligase | SFRI_RS05465 | Not Available | Positive | 1252831 - 1255455 | 95210.4 |
| carbon storage regulator csra | SFRI_RS05470 | Not Available | Positive | 1255913 - 1256110 | 7141.62 |
Pathways
1432 pathways
Health Effects
No health effects information available for this bacterium.
