Escherichia coli 536

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli 536 is a Gram-negative, rod-shaped bacterium that is facultatively anaerobic, meaning it can grow in both the presence and absence of oxygen. This organism typically resides in host-associated environments, indicating its association with living hosts. E. coli 536 is noted for its mobility, facilitated by the presence of flagella, and it typically exists as single cells or in pairs. Optimal growth of E. coli 536 occurs at 37°C, which aligns with the mesophilic temperature range where it thrives. This strain contains a single replicon and is characterized by a double-membrane structure, typical of Gram-negative bacteria. Importantly, E. coli 536 is nonsporulating, meaning it does not form spores as a means of survival under adverse conditions. E. coli 536 is recognized for its pathogenicity, indicating that it can cause disease in its host. Its ability to live freely in various environments further contributes to its ecological versatility. This bacterium exemplifies how certain strains of E. coli can be both part of the normal microbiota in hosts and also possess pathogenic potential, highlighting the dual nature of microbial relationships within ecosystems. The accession number NC_008253.1 provides a reference for genetic studies related to this specific strain. Understanding the traits of E. coli 536 can aid in comprehending its role in health and disease, particularly in host-associated habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strain536

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli 536
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityYes

Genome Summary

Escherichia coli 536


Gene Summary

Adenine Count

1222723 bp

Thymine Count

1221177 bp

Guanine Count

1243439 bp

Cytosine Count

1251581 bp

Genome Length

4938920 bp

Protein-coding Genes

4546 genes

Non-Coding Genes

166 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive1181448 - 1181459Not Available
Bifunctional nicotinamide mononucleotide adenylyltransferase/adp-ribose pyrophosphataseECP_RS05725Not AvailableNegative1184723 - 118518417433.8
23s rrna pseudouridine(2457) synthase rlueECP_RS05730Not AvailableNegative1185194 - 118584724838.7
nadp-dependent isocitrate dehydrogenaseECP_RS05735Not AvailablePositive1186019 - 118726945772.4
IntegraseECP_RS05740Not AvailableNegative1187383 - 118800023543.3
Transposase/is proteinECP_RS05745Not AvailableNegative1188067 - 118884929427.8
TransposaseECP_RS05750Not AvailableNegative1188846 - 118986839859.1
Integrase family site-specific recombinaseECP_RS05755Not AvailableNegative1189954 - 119048420512.7
excisionaseECP_RS05760Not AvailableNegative1190474 - 11907108845.89
Hypothetical proteinECP_RS05765Not AvailableNegative1190850 - 11910899477.5

Displaying genes 1 – 10 of 4712 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

534 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 534 metabolites

Health Effects

No health effects information available for this bacterium.