Escherichia coli 536

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli 536 is a Gram-negative, rod-shaped bacterium that is facultatively anaerobic, meaning it can grow in both the presence and absence of oxygen. This organism typically resides in host-associated environments, indicating its association with living hosts. E. coli 536 is noted for its mobility, facilitated by the presence of flagella, and it typically exists as single cells or in pairs. Optimal growth of E. coli 536 occurs at 37°C, which aligns with the mesophilic temperature range where it thrives. This strain contains a single replicon and is characterized by a double-membrane structure, typical of Gram-negative bacteria. Importantly, E. coli 536 is nonsporulating, meaning it does not form spores as a means of survival under adverse conditions. E. coli 536 is recognized for its pathogenicity, indicating that it can cause disease in its host. Its ability to live freely in various environments further contributes to its ecological versatility. This bacterium exemplifies how certain strains of E. coli can be both part of the normal microbiota in hosts and also possess pathogenic potential, highlighting the dual nature of microbial relationships within ecosystems. The accession number NC_008253.1 provides a reference for genetic studies related to this specific strain. Understanding the traits of E. coli 536 can aid in comprehending its role in health and disease, particularly in host-associated habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strain536

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli 536
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityYes

Genome Summary

Escherichia coli 536


Gene Summary

Adenine Count

1222723 bp

Thymine Count

1221177 bp

Guanine Count

1243439 bp

Cytosine Count

1251581 bp

Genome Length

4938920 bp

Protein-coding Genes

4546 genes

Non-Coding Genes

166 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i toxin-antitoxin system toxin mokcECP_RS00085Not AvailableNegative15467 - 156195501.89
outer membrane protein ompkECP_RS00090Not AvailablePositive16234 - 1699529207.0
sulfataseECP_RS00095Not AvailablePositive17015 - 1850855813.7
hypothetical proteinECP_RS00100Not AvailablePositive18637 - 1989647568.3
na+/h+ antiporter nhaaECP_RS00105Not AvailablePositive20131 - 2129741372.3
transcriptional activator nharECP_RS00110Not AvailablePositive21357 - 2226234293.2
30s ribosomal protein s20ECP_RS00115Not AvailableNegative22358 - 226219684.94
duf2575 family proteinECP_RS00120Not AvailablePositive22724 - 229427947.9
bifunctional riboflavin kinase/fad synthetaseECP_RS00125Not AvailablePositive22950 - 2389134736.4
isoleucine--trna ligaseECP_RS00130Not AvailablePositive23934 - 26750104360.0

Displaying genes 81 – 90 of 4712 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4846 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4846 metabolites

Health Effects

No health effects information available for this bacterium.