Myxococcus xanthus DK 1622

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Myxococcota

Class

Myxococcia

Order

Myxococcales

Family

Myxococcaceae

Genus

Myxococcus

Description

Myxococcus xanthus is a Gram-negative rod-shaped bacterium. Under starvation conditions, it undergoes a developmental process in which roughly 100,000 individual cells aggregate to form a structure called the fruiting body. Inside this structure, rod-shaped cells differentiate into spherical, thick-walled spores. Biochemical changes, such as the synthesis of new proteins and alterations in the cell wall, occur in parallel to the morphological changes. During the aggregation of M.xanthus cells into fruiting bodies, dense ridges of cells appear to move in traveling waves called ripples. Coordinated cell motility, or swarming, also occurs during vegetative growth, facilitating predatory feeding by increasing the extracellular concentration of digestive enzymes secreted by the bacteria. M.xanthus moves across surfaces by means of a poorly understood mechanism known as gliding motility. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumMyxococcota
ClassMyxococcia
OrderMyxococcales
FamilyMyxococcaceae
GenusMyxococcus
SpeciesMyxococcus xanthus
StrainDK 1622

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Myxococcus xanthus DK 1622
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature20
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationSporulating
Energy sourceChemoorganotroph
PathogenicityNo

Genome Summary

Myxococcus xanthus DK 1622

Accession NumberNC_008095.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
m16 family metallopeptidaseMXAN_RS00045Not Available+7044 - 856153275.9
hypothetical proteinMXAN_RS00050Not Available-8667 - 897511718.2
mfs transporterMXAN_RS00055Not Available-9261 - 1049643413.2
capa family proteinMXAN_RS00060Not Available-10660 - 1227656380.6
doxx family proteinMXAN_RS00065Not Available-12409 - 1291517879.4
hypothetical proteinMXAN_RS00070Not Available+13129 - 1404932774.1
trna1(val) (adenine(37)-n6)-methyltransferaseMXAN_RS00075Not Available-14066 - 1484527519.2
type ii toxin-antitoxin system hipa family toxin yjjjMXAN_RS00080Not Available+15080 - 1639048299.4
phb depolymerase family esteraseMXAN_RS00085Not Available-16412 - 1830765693.3
glutathione synthaseMXAN_RS00090Not Available-18526 - 1949435557.0

Displaying genes 41 – 50 of 7387 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

165 records
Metabolite IDMetabolite nameStructureCAS number
BASm0031890LPA(10:0/0:0)C13H27O7PChemical structure of LPA(10:0/0:0)NULL
Average326.326Da
Monoisotopic326.149440207Da
BASm0031891LPA(12:0/0:0)C15H31O7PChemical structure of LPA(12:0/0:0)NULL
Average354.38Da
Monoisotopic354.180740336Da
BASm0031892LPA(14:0/0:0)C17H35O7PChemical structure of LPA(14:0/0:0)NULL
Average382.434Da
Monoisotopic382.212040465Da
BASm0031894LPA(14:1(9Z)/0:0)C17H33O7PChemical structure of LPA(14:1(9Z)/0:0)NULL
Average380.418Da
Monoisotopic380.196390401Da
BASm0031900LPA(16:1(9Z)/0:0)C19H37O7PChemical structure of LPA(16:1(9Z)/0:0)NULL
Average408.472Da
Monoisotopic408.227690529Da
BASm0032019PA(12:0/14:0)C29H57O8PChemical structure of PA(12:0/14:0)NULL
Average564.7318Da
Monoisotopic564.379105312Da
BASm0032039PA(12:0/18:1(11Z))C33H63O8PChemical structure of PA(12:0/18:1(11Z))NULL
Average618.833Da
Monoisotopic618.426055987Da
BASm0032069PA(14:0/16:0)C33H65O8PChemical structure of PA(14:0/16:0)NULL
Average620.849Da
Monoisotopic620.441706051Da
BASm0032089PA(14:0/18:1(11Z))C35H67O8PChemical structure of PA(14:0/18:1(11Z))NULL
Average646.887Da
Monoisotopic646.457356115Da
BASm0033987PS(12:0/14:0)C32H62NO10PChemical structure of PS(12:0/14:0)NULL
Average651.819Da
Monoisotopic651.411134198Da

Displaying 151–160 of 165 metabolites