Helicobacter pylori HPAG1

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori HPAG1 is a microaerophilic, gram-negative bacterium characterized by its spiral shape (spirilla) and presence of flagella. It is found in a host-associated habitat, indicating its strong reliance on host organisms for survival and replication. HPAG1 typically exists as single cells and is considered a free-living organism, though it is primarily pathogenic, often linked to gastrointestinal diseases such as peptic ulcers and gastric cancer. This bacterium has an optimal growth temperature of 37°C and falls within the mesophilic temperature range. It possesses two replicons and features a unique double-membrane structure, which is typical for gram-negative bacteria. Importantly, HPAG1 does not form spores, indicating that it relies on other survival strategies in its microbial environment. The pathogenicity of H. pylori HPAG1 suggests a significant ecological role in its host, often leading to chronic infections that can alter the host's microbiome and overall health. Its ability to thrive in microaerophilic conditions highlights the specialized adaptations this bacterium has evolved to survive within the complex environment of the human stomach. The presence of flagella allows for motility, which may facilitate colonization and persistence in the gastric niche, further emphasizing its ecological role in host-associated environments. Accessions for H. pylori HPAG1 are listed as NC_008086.1 and NC_008087.1, providing a genomic basis for further research into its characteristics and interactions with hosts.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainHPAG1

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori HPAG1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityYes

Genome Summary

Helicobacter pylori HPAG1 plasmid pHPAG1, complete sequence.

Gene Summary

Adenine Count

3028 bp

Thymine Count

2932 bp

Guanine Count

1684 bp

Cytosine Count

1726 bp

Genome Length

9370 bp

Protein-coding Genes

8 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iv secretion system proteinHPAG1_RS00220Not AvailablePositive38802 - 3954528700.6
trbg/virb9 family p-type conjugative transfer proteinHPAG1_RS00225Not AvailablePositive39545 - 4052237373.0
dna type iv secretion system protein comb10HPAG1_RS00230Not AvailablePositive40515 - 4164541862.7
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomeraseHPAG1_RS00235Not AvailablePositive41715 - 4312753363.0
gdp-mannose 4,6-dehydrataseHPAG1_RS00240Not AvailablePositive43157 - 4430243729.3
gdp-l-fucose synthase family proteinHPAG1_RS00245Not AvailablePositive44295 - 4522734861.5
hydrogenase expression/formation protein hypeHPAG1_RS00250Not AvailableNegative45541 - 4653936339.5
carbamoyltransferase hypfHPAG1_RS00255Not AvailableNegative46542 - 4879484801.5
agmatine deiminase family proteinHPAG1_RS00260Not AvailableNegative48791 - 4978337633.4
dna-methyltransferaseHPAG1_RS00265Not AvailableNegative49843 - 5053526849.7

Displaying genes 51 – 60 of 1539 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.