Helicobacter pylori HPAG1

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori HPAG1 is a microaerophilic, gram-negative bacterium characterized by its spiral shape (spirilla) and presence of flagella. It is found in a host-associated habitat, indicating its strong reliance on host organisms for survival and replication. HPAG1 typically exists as single cells and is considered a free-living organism, though it is primarily pathogenic, often linked to gastrointestinal diseases such as peptic ulcers and gastric cancer. This bacterium has an optimal growth temperature of 37°C and falls within the mesophilic temperature range. It possesses two replicons and features a unique double-membrane structure, which is typical for gram-negative bacteria. Importantly, HPAG1 does not form spores, indicating that it relies on other survival strategies in its microbial environment. The pathogenicity of H. pylori HPAG1 suggests a significant ecological role in its host, often leading to chronic infections that can alter the host's microbiome and overall health. Its ability to thrive in microaerophilic conditions highlights the specialized adaptations this bacterium has evolved to survive within the complex environment of the human stomach. The presence of flagella allows for motility, which may facilitate colonization and persistence in the gastric niche, further emphasizing its ecological role in host-associated environments. Accessions for H. pylori HPAG1 are listed as NC_008086.1 and NC_008087.1, providing a genomic basis for further research into its characteristics and interactions with hosts.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainHPAG1

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori HPAG1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityYes

Genome Summary

Helicobacter pylori HPAG1 plasmid pHPAG1, complete sequence.

Gene Summary

Adenine Count

3028 bp

Thymine Count

2932 bp

Guanine Count

1684 bp

Cytosine Count

1726 bp

Genome Length

9370 bp

Protein-coding Genes

8 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane proteinHPAG1_RS01960Not AvailablePositive393422 - 39406625354.5
Trna-serNot AvailableNot AvailablePositive394068 - 394155Not Available
hypothetical proteinHPAG1_RS01970Not AvailableNegative394198 - 39460515386.6
pp0621 family proteinHPAG1_RS01975Not AvailableNegative394608 - 3948388955.04
16s rrna (guanine(527)-n(7))-methyltransferase rsmgHPAG1_RS01980Not AvailableNegative394832 - 39536820523.2
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaHPAG1_RS01985Not AvailableNegative395365 - 39640239997.6
twin-arginine translocase subunit tatcHPAG1_RS01990Not AvailableNegative396403 - 39712526828.6
sec-independent protein translocase protein tatbHPAG1_RS01995Not AvailableNegative397118 - 39760018397.8
holliday junction branch migration dna helicase ruvbHPAG1_RS08230Not AvailableNegative397668 - 39867837312.6
3-methyl-2-oxobutanoate hydroxymethyltransferaseHPAG1_RS08235Not AvailableNegative398679 - 39949129851.5

Displaying genes 391 – 400 of 1539 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.