Desulfitobacterium hafniense Y51

Gram-negativeBacilliMotileAnaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Desulfitobacteriaceae

Genus

Desulfitobacterium

Description

Desulfitobacterium hafniense Y51 is a specialized anaerobic bacterium characterized by its Gram-negative status and bacilli shape. It exhibits a unique cell arrangement, often found in pairs, chains, or singles. This organism is motile, possessing flagella, which aids in its movement within its anaerobic habitat. D. hafniense Y51 thrives optimally at a temperature of 37°C and falls within the mesophilic temperature range. As a free-living organism, D. hafniense Y51 does not exhibit pathogenicity, indicating that it does not cause disease in other organisms. It has a single replicon and a single membrane, which is typical for many bacteria. Additionally, it is capable of sporulation, allowing it to survive in unfavorable conditions by forming spores. The ecological role of D. hafniense Y51 is significant, particularly in environments where anaerobic conditions prevail. Its ability to sporulate and thrive in anaerobic settings contributes to its potential use in bioremediation processes, especially in the degradation of pollutants. The presence of this bacterium in specific habitats highlights its importance in maintaining ecological balance and its potential applications in environmental microbiology. The accession number for this organism is NC_007907.1, which provides a reference for further genetic and genomic studies.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyDesulfitobacteriaceae
GenusDesulfitobacterium
SpeciesDesulfitobacterium hafniense
StrainY51

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Desulfitobacterium hafniense Y51
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature37
Temperature rangeMesophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs- Chains- Singles
SporulationSporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Desulfitobacterium hafniense Y51


Gene Summary

Adenine Count

1495490 bp

Thymine Count

1519490 bp

Guanine Count

1302954 bp

Cytosine Count

1409600 bp

Genome Length

5727534 bp

Protein-coding Genes

5359 genes

Non-Coding Genes

134 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive2517196 - 2517207Not Available
N-acetylmuramyl-l-alanine amidaseDSY_RS11585Not AvailableNegative2517634 - 251834726153.9
Hypothetical secreted or membrane proteinDSY_RS11590Not AvailableNegative2518365 - 251866111047.3
Tyrosine-type recombinase/integraseDSY_RS11595Q7ZAM3Negative2518732 - 251973938227.5
hypothetical proteinDSY_RS11600Not AvailableNegative2520036 - 25202367269.76
hypothetical proteinDSY_RS29380Not AvailableNegative2520275 - 25204064634.65
hypothetical proteinDSY_RS11605Not AvailableNegative2520569 - 25208359735.87
Tail proteinDSY_RS27370Not AvailableNegative2520850 - 252234350786.9
Tail proteinDSY_RS11620Not AvailableNegative2522346 - 252286119468.1
Baseplate proteinDSY_RS11625Not AvailableNegative2522912 - 252403940438.4

Displaying genes 1 – 10 of 5493 in total

Metabolites

1726 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000232(4S)-perillyl alcoholC10H16OChemical structure of (4S)-perillyl alcoholNot available
Average152.237Da
Monoisotopic152.1201151Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 1726 metabolites

Health Effects

No health effects information available for this bacterium.