Novosphingobium aromaticivorans DSM 12444

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium aromaticivorans DSM 12444 is a Gram-negative, aerobic bacterium characterized by its bacilli shape and motility, facilitated by the presence of flagella. This species thrives in a mesophilic temperature range, indicating an optimal growth temperature typically between 20°C and 45°C. The bacterium is free-living, meaning it exists independently rather than as a part of a symbiotic or pathogenic relationship. Genetically, Novosphingobium aromaticivorans is notable for possessing two replicons, which may contribute to its metabolic versatility. The organism is surrounded by two membranes, a characteristic feature of Gram-negative bacteria that plays a role in its interactions with the environment. This bacterium can inhabit multiple environments, suggesting an ecological adaptability that may allow it to exploit various organic compounds as sources of carbon and energy. Importantly, Novosphingobium aromaticivorans is not pathogenic, indicating a role in environmental processes rather than causing disease in humans or other organisms. The ecological insight drawn from the traits of Novosphingobium aromaticivorans is its potential contribution to bioremediation. Its ability to degrade aromatic compounds may play a significant role in the detoxification of contaminated environments, highlighting its importance in microbial ecology and environmental health. Accessions for this bacterium include NC_007794.1 and NC_009427.1, which provide genomic information for further research and exploration of its capabilities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium aromaticivorans
StrainDSM 12444

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Novosphingobium aromaticivorans DSM 12444
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Novosphingobium aromaticivorans DSM 12444, complete sequence.

Gene Summary

Adenine Count

622120 bp

Thymine Count

618992 bp

Guanine Count

1159382 bp

Cytosine Count

1161090 bp

Genome Length

3561584 bp

Protein-coding Genes

3326 genes

Non-Coding Genes

153 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amidohydrolase family proteinSARO_RS17935Not AvailablePositive13126 - 1434342873.2
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylaseSARO_RS17940Not AvailablePositive14340 - 1585154289.8
glcg/hbps family heme-binding proteinSARO_RS17945Not AvailablePositive15848 - 1627614355.1
voc family proteinSARO_RS17950Not AvailablePositive16273 - 1717533104.9
fumarylacetoacetate hydrolase family proteinSARO_RS17955Not AvailablePositive17280 - 1811330017.5
alpha/beta hydrolaseSARO_RS17960Not AvailablePositive18126 - 1898330366.3
rhodanese-related sulfurtransferaseSARO_RS17965Not AvailableNegative18961 - 1991434937.6
acyl-coa dehydrogenaseSARO_RS17970Not AvailableNegative19955 - 2113942981.7
sdr family nad(p)-dependent oxidoreductaseSARO_RS17975Not AvailableNegative21234 - 2199225326.7
cupin domain-containing proteinSARO_RS17980Not AvailableNegative21989 - 2250418688.1

Displaying genes 3491 – 3500 of 3911 in total

Metabolites

541 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 541 metabolites

Health Effects

No health effects information available for this bacterium.