Frankia casuarinae

Gram-positiveFilamentousNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Frankiales

Family

Frankiaceae

Genus

Frankia

Description

Frankia casuarinae is a filamentous, Gram-positive bacterium known for its role as a symbiont in the root nodules of Casuarina species. It thrives in multiple habitats, demonstrating versatility in environmental adaptability. As a chemoorganotroph, it derives energy from organic compounds, utilizing them for growth and metabolic processes. This organism is classified as an aerobe, indicating that it requires oxygen for its survival and metabolic functions. The cell arrangement of Frankia casuarinae is filamentous, which is characteristic of its morphology and contributes to its ecological interactions. It possesses a single membrane and has one replicon, suggesting a relatively simple genetic organization. Being mesophilic, it grows optimally at moderate temperatures, making it suitable for various temperate climates. One notable aspect of Frankia casuarinae is its immobility, which influences its ecological niche and symbiotic relationships. The bacterium forms root nodules in its host plants, where it fixes atmospheric nitrogen, providing essential nutrients to the plant while receiving carbohydrates in return. This mutualistic relationship enhances soil fertility and promotes plant growth, particularly in nutrient-poor environments. Overall, Frankia casuarinae exemplifies the intricate relationships within ecosystems, illustrating how microbial life plays a vital role in nutrient cycling and plant health, ultimately contributing to the stability and productivity of the ecosystems in which it resides. Its accession number is NC_007777.1, which provides a reference for further genomic studies and insights into its biological functions.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderFrankiales
FamilyFrankiaceae
GenusFrankia
SpeciesFrankia casuarinae
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeFilamentous
MobilityNo
Flagellar presenceNot Available
Number of membranes1
Image of Frankia casuarinae
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipSymbiotic
Host(s)Not Available
Cell arrangementFilaments
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Frankia casuarinae, complete sequence.

Gene Summary

Adenine Count

813969 bp

Thymine Count

811837 bp

Guanine Count

1903584 bp

Cytosine Count

1904238 bp

Genome Length

5433628 bp

Protein-coding Genes

4683 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamate abc transporter substrate-binding proteinFRANCCI3_RS17765Not AvailablePositive4204737 - 420569333950.3
amino acid abc transporter permeaseFRANCCI3_RS17770Not AvailablePositive4205870 - 420651722863.4
amino acid abc transporter permeaseFRANCCI3_RS17775Not AvailablePositive4206514 - 420739531988.0
ribonuclease yFRANCCI3_RS17780Not AvailableNegative4207341 - 420928170342.3
recombination regulator recxFRANCCI3_RS17785Not AvailableNegative4209625 - 421023321552.8
recombinase recaFRANCCI3_RS17790Not AvailableNegative4210237 - 421127436526.9
duf3046 domain-containing proteinFRANCCI3_RS17795Not AvailableNegative4211441 - 42116357160.45
atp-dependent helicaseFRANCCI3_RS17800Not AvailablePositive4211793 - 4216496166556.0
rna polymerase sigma factorFRANCCI3_RS17805Not AvailableNegative4216474 - 421702520443.4
padr family transcriptional regulatorFRANCCI3_RS24915Not AvailablePositive4217672 - 421851630603.4

Displaying genes 3741 – 3750 of 4767 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.