Anaeromyxobacter dehalogenans 2CP-C

Gram-negativeRodMotileAerobe; anaerobe

Kingdom

Pseudomonadati

Phylum

Myxococcota

Class

Myxococcia

Order

Myxococcales

Family

Anaeromyxobacteraceae

Genus

Anaeromyxobacter

Description

The delta-Proteobacterium Anaeromyxobacter dehalogenans utilizes halogenated compounds, such as 2-chlorophenol, 2,6-dichlorophenol, 2,5-dichlorophenol, and 2-bromophenol, as growth-supporting electron acceptors (halorespiration). Anaeromyxobacter dehalogenans exhibits metabolic versatility, and grows under a variety of redox conditions. Oxidized metal species such as U(VI) and Fe(III) (including ferric oxyhydroxide), anthraquinone disulfonate (AQDS), halogenated phenols, oxygen, nitrate, nitrite, and fumarate are used in terminal electron accepting processes (TEAPs). Also, Anaeromyxobacter dehalogenans demonstrates great electron donor versatility, and couples electron acceptor reduction to the oxidation of a variety of compounds including formate, hydrogen, acetate, succinate, pyruvate, and glucose. A. dehalogenans tolerates high concentrations of reduced products such as phenol or ammonium and has been found to be the predominant metal reducing populations at uranium-contaminated sites that are characterized by changing redox conditions and low pH. A feature that distinguishes A. dehalogenans from other reductively dechlorinating and metal-reducing populations is this organism's ability to both use acetate and hydrogen as a source of reducing equivalents. Sequencing its genome will provide relevant information regarding reductive dehalogenase genes and the organization of reductive dehalogenase operons. Such information is critical for the design of nucleic acid-based tools to detect, monitor and quantify functional genes involved in reductive dechlorination processes at contaminated sites. (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumMyxococcota
ClassMyxococcia
OrderMyxococcales
FamilyAnaeromyxobacteraceae
GenusAnaeromyxobacter
SpeciesAnaeromyxobacter dehalogenans
Strain2CP-C

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Anaeromyxobacter dehalogenans 2CP-C
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe; anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationSporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Anaeromyxobacter dehalogenans 2CP-C

Accession NumberNC_007760.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4482 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiator protein dnaaADEH_RS00015Not Available+46 - 139550261.9
dna polymerase iii subunit betaADEH_RS00020Not Available+1811 - 293841141.0
dna replication/repair protein recfADEH_RS00025Not Available+2958 - 407639684.8
dna topoisomerase (atp-hydrolyzing) subunit bADEH_RS00030Not Available+4192 - 665190640.1
3-oxoacyl-acp synthase iii family proteinADEH_RS00035Not Available+6733 - 772836100.3
Trna-glnNot AvailableNot Available+7820 - 7893Not Available
archaemetzincinADEH_RS00045Not Available+7938 - 845917996.7
hypothetical proteinADEH_RS00050Not Available+8456 - 925928275.6
(fe-s)-binding proteinADEH_RS00055Not Available-9256 - 1139176924.3
hypothetical proteinADEH_RS00060Not Available-11509 - 1253736588.6

Displaying genes 1 – 10 of 4541 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

59 records
Metabolite IDMetabolite nameStructureCAS number
BASm0017364(R)-2,3-Dihydroxy-isovalerateC5H10O4Chemical structure of (R)-2,3-Dihydroxy-isovalerateNULL
Average134.1305Da
Monoisotopic134.057908808Da
BASm0017450(R) 2,3-Dihydroxy-3-methylvalerateC6H12O4Chemical structure of (R) 2,3-Dihydroxy-3-methylvalerate562-43-6
Average148.1571Da
Monoisotopic148.073558872Da
BASm0017553N-(5-Phospho-D-ribosyl)anthranilateC12H16NO9PChemical structure of N-(5-Phospho-D-ribosyl)anthranilate4220-99-9
Average349.2305Da
Monoisotopic349.056267627Da
BASm00177315,10-MethenyltetrahydrofolateC20H22N7O6Chemical structure of 5,10-Methenyltetrahydrofolate7444-29-3
Average456.432Da
Monoisotopic456.163156471Da
BASm00191503b-AllotetrahydrocortisolC19H35N5O6SeChemical structure of 3b-AllotetrahydrocortisolNULL
Average508.489Da
Monoisotopic509.175256Da
BASm0019931N-Acetylglutamic acidC7H11NO5Chemical structure of N-Acetylglutamic acid1188-37-0
Average189.1659Da
Monoisotopic189.063722467Da
BASm00199745-Methylthioribulose 1-phosphateC6H13O7PSChemical structure of 5-Methylthioribulose 1-phosphate86316-83-8
Average260.202Da
Monoisotopic260.011959972Da
BASm00200023-Dehydroshikimic acidC7H8O5Chemical structure of 3-Dehydroshikimic acid27655-56-7
Average172.1354Da
Monoisotopic172.037173366Da
BASm0034737(6S)-5,6,7,8-tetrahydrofolic acidC19H23N7O6Chemical structure of (6S)-5,6,7,8-tetrahydrofolic acidNULL
Average445.4292Da
Monoisotopic445.170981503Da

Displaying 51–59 of 59 metabolites