Methanosphaera stadtmanae DSM 3091

CocciNon-motileAnaerobic

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanobacteria

Order

Methanobacteriales

Family

Methanobacteriaceae

Genus

Methanosphaera

Description

Methanosphaera stadtmanae DSM 3091 is an anaerobic, free-living archaeon that plays a significant role in the microbiota of the host environment. This organism is characterized by its cocci shape and typically forms pairs or tetrads. It has a single membrane and contains one replicon, which indicates its genomic structure. As a lithotroph, Methanosphaera stadtmanae utilizes inorganic compounds as its energy source, thriving in environments devoid of oxygen. It exhibits optimal growth at 36°C, placing it within the mesophilic temperature range. This temperature preference suggests that it is well-adapted to the physiological conditions of its host organisms. Importantly, Methanosphaera stadtmanae lacks mobility and does not possess flagella, which is consistent with its lifestyle as a host-associated organism. It is not pathogenic, indicating that it does not cause disease in its host. The accession number for this organism is NC_007681.1, providing a reference for genomic studies. In summary, Methanosphaera stadtmanae DSM 3091 is a non-pathogenic archaeon that contributes to the anaerobic processes within its host environment, utilizing inorganic substrates as its energy source. Its adaptation to mesophilic conditions and its characteristic cellular arrangement enhance its ecological role in maintaining the balance of microbial communities.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanobacteria
OrderMethanobacteriales
FamilyMethanobacteriaceae
GenusMethanosphaera
SpeciesMethanosphaera stadtmanae
StrainDSM 3091

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature36
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs- Tetrads
SporulationNot Available
Energy sourceLithotroph
PathogenicityNo

Genome Summary

Methanosphaera stadtmanae DSM 3091, complete sequence.

Gene Summary

Adenine Count

645239 bp

Thymine Count

633765 bp

Guanine Count

242608 bp

Cytosine Count

245791 bp

Genome Length

1767403 bp

Protein-coding Genes

1559 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-proNot AvailableNot AvailablePositive1550611 - 1550685Not Available
Trna-thrNot AvailableNot AvailablePositive1550701 - 1550777Not Available
phosphoglycerate kinaseMSP_RS06865Not AvailableNegative1550941 - 155217045248.7
triose-phosphate isomeraseMSP_RS06870Not AvailableNegative1552205 - 155288223888.6
4-demethylwyosine synthase tyw1MSP_RS06875Not AvailablePositive1553063 - 155401036390.4
duf1002 domain-containing proteinMSP_RS06880Not AvailablePositive1554046 - 155494232001.9
efr1 family ferrodoxinMSP_RS06885Not AvailablePositive1555115 - 155588529855.3
adp-forming succinate--coa ligase subunit betaMSP_RS06890Not AvailableNegative1555909 - 155702440965.2
2-oxoacid:ferredoxin oxidoreductase subunit gammaMSP_RS06895Not AvailableNegative1557035 - 155758920119.2
2-oxoacid:ferredoxin oxidoreductase subunit betaMSP_RS06900Not AvailableNegative1557592 - 155846131852.0

Displaying genes 1401 – 1410 of 1614 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

422 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da

Displaying 1–10 of 422 metabolites

Health Effects

No health effects information available for this bacterium.