Sulfurimonas denitrificans DSM 1251

Gram-negativeSpirillaNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Sulfurimonadaceae

Genus

Sulfurimonas

Description

Sulfurimonas denitrificans DSM 1251 is a marine, anaerobic bacterium characterized by its spirilla shape and single-cell arrangement. This Gram-negative organism is non-motile and possesses flagella, which may play a role in its ecological interactions despite its lack of mobility. Sulfurimonas denitrificans thrives optimally at a temperature of 20°C and falls within the mesophilic temperature range. This bacterium is free-living and exhibits a biotic relationship with its surroundings, contributing to the biogeochemical cycling of sulfur and nitrogen. It has a unique cellular structure with two membranes and contains one replicon, which is significant for its genetic organization. Importantly, Sulfurimonas denitrificans is non-sporulating and does not exhibit pathogenicity, indicating that it is not harmful to humans or other organisms. The ecological role of Sulfurimonas denitrificans in marine mud habitats highlights its potential contribution to denitrification processes, which are crucial for nitrogen cycling in marine ecosystems. By facilitating the conversion of nitrate to nitrogen gas, this bacterium plays a vital role in maintaining the balance of nitrogen levels in marine environments, thus supporting overall ecosystem health. The accession number NC_007575.1 provides a reference for genetic studies related to this species, furthering our understanding of its biology and ecological importance.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilySulfurimonadaceae
GenusSulfurimonas
SpeciesSulfurimonas denitrificans
StrainDSM 1251

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Sulfurimonas denitrificans DSM 1251
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature20
Temperature rangeMesophilic
HabitatMarine- Mud
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Sulfurimonas denitrificans DSM 1251


Gene Summary

Adenine Count

726668 bp

Thymine Count

716192 bp

Guanine Count

381751 bp

Cytosine Count

376950 bp

Genome Length

2201561 bp

Protein-coding Genes

2155 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chromosomal replication initiator protein dnaaSUDEN_RS00005Not AvailablePositive15 - 132249943.6
dna polymerase iii subunit betaSUDEN_RS00010Not AvailablePositive1490 - 255740214.5
dna topoisomerase (atp-hydrolyzing) subunit bSUDEN_RS00015Not AvailablePositive2707 - 501686629.5
preq(1) synthaseSUDEN_RS00020Not AvailablePositive5041 - 541814847.8
cca trna nucleotidyltransferaseSUDEN_RS00025Not AvailableNegative5407 - 664247272.1
translational gtpase typaSUDEN_RS00030Not AvailablePositive6798 - 860066912.6
tonb-dependent receptorSUDEN_RS00035Not AvailablePositive8748 - 1067372367.5
7tm diverse intracellular signaling domain-containing proteinSUDEN_RS00040Not AvailableNegative10712 - 1260472785.2
response regulatorSUDEN_RS00045Not AvailableNegative12601 - 1327526169.9
filamentous hemagglutinin n-terminal domain-containing proteinSUDEN_RS11360Not AvailablePositive13468 - 16977121328.0

Displaying genes 1 – 10 of 2214 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1727 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da

Displaying 1–10 of 1727 metabolites

Health Effects

No health effects information available for this bacterium.