Pseudomonas fluorescens Pf0-1

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fluorescens Pf0-1 is a gram-negative, rod-shaped bacterium that thrives in multiple habitats. It is a heterotrophic organism that requires oxygen for growth, classifying it as an aerobe. This species is characterized by its single-cell arrangement and the presence of flagella, which contribute to its mobility. P. fluorescens Pf0-1 is mesophilic, with an optimal growth temperature of 25°C, and it can survive within a temperature range that is typical of mesophilic organisms. It possesses a unique genetic structure, having one replicon and a double membrane system. Importantly, P. fluorescens Pf0-1 is nonpathogenic and does not form spores, which distinguishes it from other bacteria that may have pathogenic potential or sporulation as a survival mechanism. In terms of its ecological role, P. fluorescens Pf0-1 exists as a free-living organism, functioning independently in its environment. The ability to thrive in diverse habitats and its metabolic versatility highlight its role in nutrient cycling and ecological balance. This bacterium's characteristics enable it to adapt to various conditions, contributing to its significance in soil health and potentially in biocontrol applications. Overall, Pseudomonas fluorescens Pf0-1 exemplifies the adaptability and ecological importance of nonpathogenic bacteria in natural ecosystems. Its presence can influence microbial communities and contribute to the sustainability of environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fluorescens
StrainPf0-1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas fluorescens Pf0-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Pseudomonas fluorescens Pf0-1, complete sequence.

Gene Summary

Adenine Count

1276547 bp

Thymine Count

1265274 bp

Guanine Count

1943981 bp

Cytosine Count

1952603 bp

Genome Length

6438405 bp

Protein-coding Genes

5737 genes

Non-Coding Genes

139 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
eal domain-containing proteinPFL01_RS19950Not AvailablePositive4496043 - 449720643765.3
deoxyguanosinetriphosphate triphosphohydrolasePFL01_RS19955Not AvailablePositive4497275 - 449860349713.4
response regulator transcription factorPFL01_RS19960Not AvailablePositive4498952 - 449957823379.9
transporter substrate-binding domain-containing proteinPFL01_RS19965Not AvailablePositive4499587 - 4503231134949.0
hd domain-containing phosphohydrolasePFL01_RS19970Not AvailablePositive4503280 - 4506222109078.0
gaf domain-containing proteinPFL01_RS19975Not AvailableNegative4506223 - 450670517229.5
atp-binding proteinPFL01_RS19980Not AvailableNegative4506702 - 450759233676.1
response regulatorPFL01_RS19985Not AvailablePositive4507759 - 451008084986.7
marr family winged helix-turn-helix transcriptional regulatorPFL01_RS19990Not AvailableNegative4510064 - 451052517279.1
glutathione peroxidasePFL01_RS19995Not AvailableNegative4510522 - 451100717696.5

Displaying genes 4061 – 4070 of 5876 in total

Metabolites

2343 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 2343 metabolites

Health Effects

No health effects information available for this bacterium.