Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Candidatus Pelagibacterales
Family
Candidatus Pelagibacteraceae
Genus
Candidatus Pelagibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Candidatus Pelagibacterales |
| Family | Candidatus Pelagibacteraceae |
| Genus | Candidatus Pelagibacter |
| Species | Candidatus Pelagibacter communis |
| Strain | HTCC1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Oligotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
462100 bp
Thymine Count
458179 bp
Guanine Count
195146 bp
Cytosine Count
193334 bp
Genome Length
1308759 bp
Protein-coding Genes
1345 genes
Non-Coding Genes
37 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobaltochelatase subunit cobs | SAR11_RS02265 | P29933 | Negative | 446380 - 447354 | 36844.2 |
| j domain-containing protein | SAR11_RS02270 | Not Available | Negative | 447344 - 447871 | 20986.8 |
| bola/ibag family iron-sulfur metabolism protein | SAR11_RS02275 | Not Available | Positive | 447897 - 448157 | 10134.7 |
| 3-dehydroquinate synthase | SAR11_RS02280 | Q4FNG5 | Negative | 448146 - 449252 | 41373.0 |
| shikimate kinase | SAR11_RS02285 | B5YHI3 | Negative | 449239 - 449751 | 19262.8 |
| hypothetical protein | SAR11_RS07045 | Not Available | Positive | 449810 - 449986 | 6426.23 |
| hypothetical protein | SAR11_RS02290 | Not Available | Positive | 449961 - 451721 | 68332.8 |
| peptide deformylase | SAR11_RS02295 | Q4FNG1 | Positive | 451748 - 452266 | 19670.1 |
| methionyl-trna formyltransferase | SAR11_RS02300 | Q4FNG0 | Positive | 452267 - 453199 | 34972.4 |
| trna pseudouridine(38-40) synthase trua | SAR11_RS02305 | Q4FNF9 | Positive | 453192 - 453932 | 28394.2 |
Pathways
1132 pathways
Health Effects
No health effects information available for this bacterium.
