Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Candidatus Pelagibacterales
Family
Candidatus Pelagibacteraceae
Genus
Candidatus Pelagibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Candidatus Pelagibacterales |
| Family | Candidatus Pelagibacteraceae |
| Genus | Candidatus Pelagibacter |
| Species | Candidatus Pelagibacter communis |
| Strain | HTCC1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Oligotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
462100 bp
Thymine Count
458179 bp
Guanine Count
195146 bp
Cytosine Count
193334 bp
Genome Length
1308759 bp
Protein-coding Genes
1345 genes
Non-Coding Genes
37 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme lyase ccmf/nrfe family subunit | SAR11_RS01415 | Q00500 | Negative | 286249 - 287970 | 66139.3 |
| cytochrome c maturation protein ccme | SAR11_RS01420 | Q4FNY3 | Negative | 288128 - 288547 | 15693.4 |
| heme exporter protein ccmd | SAR11_RS01425 | Not Available | Negative | 288558 - 288785 | 8517.24 |
| heme abc transporter permease ccmc | SAR11_RS01430 | P30962 | Negative | 288782 - 289492 | 26593.2 |
| heat shock protein hspq | SAR11_RS01435 | Not Available | Negative | 289675 - 289995 | 12548.6 |
| septation protein a | SAR11_RS01440 | Q8UC06 | Positive | 290074 - 290625 | 21501.9 |
| duf2794 domain-containing protein | SAR11_RS01445 | Not Available | Positive | 290618 - 290962 | 13413.3 |
| bax inhibitor-1/ycca family protein | SAR11_RS01450 | Q9ZE15 | Negative | 290968 - 291729 | 28009.3 |
| aldo/keto reductase | SAR11_RS01455 | P0A9T4 | Positive | 291790 - 292827 | 39774.4 |
| invasion associated locus b family protein | SAR11_RS01460 | Not Available | Positive | 292818 - 293324 | 18766.7 |
Pathways
1132 pathways
Health Effects
No health effects information available for this bacterium.
