Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Candidatus Pelagibacterales
Family
Candidatus Pelagibacteraceae
Genus
Candidatus Pelagibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Candidatus Pelagibacterales |
| Family | Candidatus Pelagibacteraceae |
| Genus | Candidatus Pelagibacter |
| Species | Candidatus Pelagibacter communis |
| Strain | HTCC1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Oligotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
462100 bp
Thymine Count
458179 bp
Guanine Count
195146 bp
Cytosine Count
193334 bp
Genome Length
1308759 bp
Protein-coding Genes
1345 genes
Non-Coding Genes
37 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase large subunit | SAR11_RS01260 | Q4FP15 | Negative | 255662 - 257065 | 50852.7 |
| 50s ribosomal protein l19 | SAR11_RS01265 | Q4FP14 | Negative | 257077 - 257571 | 18765.9 |
| trna (guanosine(37)-n1)-methyltransferase trmd | SAR11_RS01270 | Q4FP13 | Negative | 257588 - 258274 | 25889.9 |
| 30s ribosomal protein s16 | SAR11_RS01275 | Q4FP12 | Negative | 258283 - 258816 | 18757.4 |
| signal recognition particle protein | SAR11_RS01280 | Q4UKH4 | Negative | 258831 - 260189 | 49539.8 |
| diaminopimelate epimerase | SAR11_RS01285 | Q4FP10 | Positive | 260349 - 261173 | 30103.5 |
| signal recognition particle-docking protein ftsy | SAR11_RS01290 | Q1RKK5 | Positive | 261173 - 262090 | 33781.2 |
| hypothetical protein | SAR11_RS01295 | Not Available | Negative | 262083 - 262646 | 22216.4 |
| dmt family transporter | SAR11_RS01300 | O31540 | Negative | 262705 - 263598 | 33803.4 |
| amidase | SAR11_RS01310 | Q8R679 | Negative | 263780 - 265117 | 49847.0 |
Pathways
1132 pathways
Health Effects
No health effects information available for this bacterium.
