Bdellovibrio bacteriovorus HD100

Gram-negativeCurvedShapedNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Bdellovibrionota

Class

Bdellovibrionia

Order

Bdellovibrionales

Family

Pseudobdellovibrionaceae

Genus

Bdellovibrio

Description

Bdellovibrio bacteriovorus HD100 is a gram-negative, curved-shaped bacterium known for its unique predatory behavior, specifically targeting and invading other gram-negative bacteria. It exhibits a filamentous cell arrangement and possesses a single replicon, indicating a streamlined genome organization. This organism is aerobic, requiring oxygen for growth, and thrives optimally at a temperature of 28°C, fitting within the mesophilic temperature range. B. bacteriovorus HD100 is non-motile with the presence of flagella, which is unusual for organisms in its ecological niche. Its dual membrane structure is characteristic of gram-negative bacteria, contributing to its resilience in various habitats. Despite its predatory nature, it is not considered pathogenic to higher organisms, making it a subject of interest for biocontrol applications in microbial ecosystems. The ecological role of Bdellovibrio bacteriovorus HD100 is significant as it helps regulate bacterial populations in its environment, potentially preventing the overgrowth of harmful bacteria. Its predation can influence microbial community dynamics, nutrient cycling, and the overall health of ecosystems where it resides. This bacterium's ability to control other bacterial species underscores its potential utility in biotechnology and environmental management, particularly in combating bacterial infections or biofilm formation in various settings.

Taxonomy

KingdomPseudomonadati
PhylumBdellovibrionota
ClassBdellovibrionia
OrderBdellovibrionales
FamilyPseudobdellovibrionaceae
GenusBdellovibrio
SpeciesBdellovibrio bacteriovorus
StrainHD100

Profile

Physiology
Gram staining propertiesNegative
ShapeCurvedShaped
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bdellovibrio bacteriovorus HD100
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementFilaments
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Bdellovibrio bacteriovorus HD100, complete sequence.

Gene Summary

Adenine Count

932069 bp

Thymine Count

934987 bp

Guanine Count

959802 bp

Cytosine Count

956092 bp

Genome Length

3782950 bp

Protein-coding Genes

3555 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arginine n-succinyltransferaseBD_RS00605Not AvailablePositive114269 - 11529738808.2
succinylglutamate-semialdehyde dehydrogenaseBD_RS00610Not AvailablePositive115301 - 11681855891.1
endolytic transglycosylase mltgBD_RS00615Not AvailablePositive116818 - 11790040296.7
hypothetical proteinBD_RS00620Not AvailableNegative117897 - 11839117849.6
lysine-sensitive aspartokinase 3BD_RS00625Not AvailablePositive118476 - 11985849996.7
nitroreductase family proteinBD_RS00630Not AvailablePositive119907 - 12050623035.7
trna dihydrouridine synthase dusbBD_RS00635Not AvailablePositive120739 - 12175236895.3
translational gtpase typaBD_RS00640Not AvailablePositive121875 - 12368967605.6
abc transporter atp-binding proteinBD_RS00645Not AvailablePositive123689 - 12461534763.2
abc transporter permeaseBD_RS00650Not AvailablePositive124615 - 12540329444.0

Displaying genes 121 – 130 of 3601 in total

Metabolites

1655 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da

Displaying 1–10 of 1655 metabolites

Health Effects

No health effects information available for this bacterium.