Buchnera aphidicola str. Sg (Schizaphis graminum)

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Buchnera

Description

Buchnera aphidicola str. Sg (Schizaphis graminum) is a Gram-negative, mesophilic bacterium that exhibits a symbiotic relationship with its host, specifically the greenbug aphid Schizaphis graminum. This bacterium is characterized by its single-cell arrangement and is known for its role in providing essential nutrients to its aphid host, which is particularly important for the aphid's development and reproduction. As a host-associated organism, Buchnera aphidicola str. Sg lives in close proximity to its host, relying on the aphid for a stable environment and nutrients. The bacterium does not exhibit pathogenicity, indicating that it does not cause disease or harm to its host. Instead, its presence is beneficial, facilitating the aphid's ability to thrive on a diet that is otherwise nutritionally inadequate. With only one replicon, Buchnera aphidicola str. Sg demonstrates a streamlined genome that is typical of obligate symbionts, reflecting its specialized lifestyle and dependence on the aphid host. The genetic accession for this strain is NC_004061.1, which provides a reference for further study and understanding of its genomic features. In summary, the mutualistic relationship between Buchnera aphidicola str. Sg and Schizaphis graminum highlights the importance of symbiotic bacteria in supporting the survival and fitness of herbivorous insects. This interaction underscores the intricate dependencies that can arise in ecological systems, where microorganisms play critical roles in the health and sustainability of their hosts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusBuchnera
SpeciesBuchnera aphidicola
StrainSg

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Buchnera aphidicola str. Sg (Schizaphis graminum)


Gene Summary

Adenine Count

240402 bp

Thymine Count

238568 bp

Guanine Count

82092 bp

Cytosine Count

80392 bp

Genome Length

641454 bp

Protein-coding Genes

592 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ef-p beta-lysylation protein epmbBUSG_RS00105Not AvailableNegative20390 - 2140339503.9
elongation factor pBUSG_RS00110Not AvailablePositive21429 - 2199221469.9
dna replication protein dnacBUSG_RS00115Not AvailableNegative22015 - 2275528499.2
primosomal protein dnatBUSG_RS00120Not AvailableNegative22755 - 2325519666.2
hydroxymethylbilane synthaseBUSG_RS00125Not AvailableNegative23300 - 2387121517.9
signal recognition particle-docking protein ftsyBUSG_RS00130Not AvailablePositive24003 - 2505839472.6
rna polymerase sigma factor rpohBUSG_RS00135Not AvailablePositive25214 - 2607133300.4
glutamine--fructose-6-phosphate transaminase (isomerizing)BUSG_RS00140Not AvailableNegative26225 - 2805168481.3
bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmuBUSG_RS00145Not AvailableNegative28115 - 2950051737.5
cof-type had-iib family hydrolaseBUSG_RS00150Not AvailablePositive29642 - 3046631350.2

Displaying genes 21 – 30 of 630 in total

Metabolites

225 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da

Displaying 1–10 of 225 metabolites

Health Effects

No health effects information available for this bacterium.