Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yigz family protein | SPO_RS04720 | Not Available | Positive | 991098 - 991466 | 13088.8 |
| duf6455 family protein | SPO_RS04725 | Not Available | Positive | 991538 - 991789 | 9277.94 |
| duf6455 family protein | SPO_RS04730 | Not Available | Positive | 991820 - 992077 | 9572.44 |
| cdgsh iron-sulfur domain-containing protein | SPO_RS04735 | P0C7P0 | Negative | 992078 - 992320 | 8692.3 |
| hypothetical protein | SPO_RS22775 | Not Available | Negative | 992481 - 993185 | 26033.1 |
| 30s ribosomal protein s12 methylthiotransferase rimo | SPO_RS04740 | Q5LUV8 | Negative | 993167 - 994558 | 51119.7 |
| asma family protein | SPO_RS04745 | Not Available | Positive | 994656 - 996593 | 66491.8 |
| phosphomannomutase/phosphoglucomutase | SPO_RS04750 | Q88C93 | Negative | 996821 - 998317 | 54378.9 |
| 3-deoxy-8-phosphooctulonate synthase | SPO_RS04755 | Q11HU7 | Negative | 998338 - 999171 | 29229.3 |
| capsule biosynthesis protein | SPO_RS04760 | Not Available | Negative | 999176 - 1000894 | 63490.9 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
