Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl-acp synthase iii | SPO_RS04625 | Q9HYV7 | Negative | 971104 - 972231 | 40841.6 |
| marr family winged helix-turn-helix transcriptional regulator | SPO_RS04630 | Not Available | Positive | 972395 - 972868 | 17453.0 |
| efflux rnd transporter periplasmic adaptor subunit | SPO_RS04635 | Not Available | Positive | 972953 - 973903 | 33607.9 |
| efflux rnd transporter permease subunit | SPO_RS04640 | P25197 | Positive | 973915 - 976947 | 108062.0 |
| voc family protein | SPO_RS04645 | Not Available | Negative | 976962 - 977372 | 14677.8 |
| carbamoyl-phosphate synthase large subunit | SPO_RS04650 | Q9A4D6 | Negative | 977564 - 980932 | 121625.0 |
| aminodeoxychorismate synthase component i | SPO_RS04655 | F2RB79 | Positive | 981129 - 982250 | 40273.3 |
| aminotransferase class iv family protein | SPO_RS04660 | Not Available | Positive | 982205 - 982852 | 23292.0 |
| aspartate--trna ligase | SPO_RS04665 | Q5LUX6 | Positive | 983054 - 984835 | 66358.0 |
| bglii/bstyi family type ii restriction endonuclease | SPO_RS04670 | Not Available | Negative | 984843 - 985556 | 25874.5 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
