Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | SPO_RS04385 | P76250 | Positive | 927188 - 928111 | 34150.2 |
| hydroxyisourate hydrolase | SPO_RS04390 | Q92UG5 | Negative | 928330 - 928686 | 12912.4 |
| allantoinase puue | SPO_RS04395 | O13842 | Positive | 928971 - 930386 | 52765.3 |
| ureidoglycolate lyase | SPO_RS04400 | O68109 | Positive | 930383 - 930871 | 17607.8 |
| nucleobase:cation symporter-2 family protein | SPO_RS04405 | P50487 | Positive | 930938 - 932350 | 48217.3 |
| type i glyceraldehyde-3-phosphate dehydrogenase | SPO_RS04410 | P51009 | Negative | 932525 - 933508 | 34324.3 |
| bifunctional allantoicase/(s)-ureidoglycine aminohydrolase | SPO_RS04415 | P75713 | Negative | 933711 - 934538 | 30847.8 |
| hypothetical protein | SPO_RS04420 | Not Available | Positive | 934723 - 935070 | 12147.7 |
| alpha/beta fold hydrolase | SPO_RS22405 | Not Available | Positive | 935274 - 936053 | 28321.8 |
| glycine cleavage system protein gcvh | SPO_RS04430 | Q92Q10 | Positive | 936296 - 936655 | 13191.4 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
