Ruegeria pomeroyi DSS-3

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Ruegeria

Description

Ruegeria pomeroyi DSS-3 is a Gram-negative, aerobic bacterium characterized by its bacilli shape and mobility. It is a heterotrophic organism that thrives in aquatic environments. The strain DSS-3 is mesophilic, indicating it prefers moderate temperature ranges for growth. This bacterium is notable for being free-living, which means it does not rely on a host organism for survival. With a single replicon, Ruegeria pomeroyi DSS-3 can efficiently manage its genetic information, contributing to its adaptability in various aquatic habitats. The strain is cataloged under the accession number NC_003911.12. The ecological relevance of Ruegeria pomeroyi DSS-3 lies in its role in marine ecosystems. As a heterotroph, it contributes to the cycling of organic matter in aquatic environments, potentially influencing nutrient dynamics and the overall health of marine ecosystems. Its mobility may also play a significant role in its ability to colonize different niches within these habitats, further enhancing its ecological impact.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRuegeria
SpeciesRuegeria pomeroyi
StrainDSS-3

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Ruegeria pomeroyi DSS-3, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rok family transcriptional regulatorSPO_RS04335D2PPN2Negative911495 - 91270042966.8
d-xylose abc transporter substrate-binding proteinSPO_RS04340P37387Positive912911 - 91393935468.7
sugar abc transporter permeaseSPO_RS04345P0AGI6Positive914006 - 91530445503.1
atp-binding cassette domain-containing proteinSPO_RS04350Q9F9B0Positive915304 - 91607127763.4
glucokinaseSPO_RS04355B0RSF9Positive916074 - 91699731727.9
gfo/idh/moca family proteinSPO_RS04360P49305Positive916994 - 91798035999.8
gamma-glutamyltransferase family proteinSPO_RS04365Not AvailableNegative918038 - 91982864117.4
translocation/assembly module tamb domain-containing proteinSPO_RS04370Not AvailableNegative919832 - 923914138920.0
autotransporter assembly complex family proteinSPO_RS04375Not AvailableNegative923914 - 92571964290.9
urate hydroxylase puudSPO_RS04380Not AvailableNegative925864 - 92709346119.7

Displaying genes 891 – 900 of 4001 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.