Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rok family transcriptional regulator | SPO_RS04335 | D2PPN2 | Negative | 911495 - 912700 | 42966.8 |
| d-xylose abc transporter substrate-binding protein | SPO_RS04340 | P37387 | Positive | 912911 - 913939 | 35468.7 |
| sugar abc transporter permease | SPO_RS04345 | P0AGI6 | Positive | 914006 - 915304 | 45503.1 |
| atp-binding cassette domain-containing protein | SPO_RS04350 | Q9F9B0 | Positive | 915304 - 916071 | 27763.4 |
| glucokinase | SPO_RS04355 | B0RSF9 | Positive | 916074 - 916997 | 31727.9 |
| gfo/idh/moca family protein | SPO_RS04360 | P49305 | Positive | 916994 - 917980 | 35999.8 |
| gamma-glutamyltransferase family protein | SPO_RS04365 | Not Available | Negative | 918038 - 919828 | 64117.4 |
| translocation/assembly module tamb domain-containing protein | SPO_RS04370 | Not Available | Negative | 919832 - 923914 | 138920.0 |
| autotransporter assembly complex family protein | SPO_RS04375 | Not Available | Negative | 923914 - 925719 | 64290.9 |
| urate hydroxylase puud | SPO_RS04380 | Not Available | Negative | 925864 - 927093 | 46119.7 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
