Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SPO_RS04285 | Not Available | Negative | 898156 - 899616 | 53931.6 |
| wecb/taga/cpsf family glycosyltransferase | SPO_RS04290 | Not Available | Positive | 899798 - 900550 | 27069.2 |
| nad-dependent epimerase/dehydratase family protein | SPO_RS04295 | Q92KZ3 | Negative | 900553 - 902652 | 74901.1 |
| glycosyltransferase family 2 protein | SPO_RS04300 | Not Available | Negative | 902660 - 903625 | 35210.8 |
| glycosyltransferase family 4 protein | SPO_RS04305 | Not Available | Negative | 903622 - 904701 | 39327.1 |
| xylulokinase | SPO_RS04310 | P29444 | Positive | 904916 - 906364 | 50294.0 |
| xylose isomerase | SPO_RS04315 | Q5LV46 | Positive | 906361 - 907665 | 48717.4 |
| aldose epimerase family protein | SPO_RS04320 | Q03PA4 | Positive | 907658 - 908623 | 35013.3 |
| cytochrome-c peroxidase | SPO_RS04325 | P0DV69 | Positive | 908620 - 909918 | 46160.9 |
| crtac1 family protein | SPO_RS04330 | Not Available | Negative | 909976 - 911505 | 54586.0 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
