Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin cofactor-binding domain-containing protein | SPO_RS04185 | Q46509 | Negative | 862415 - 865159 | 95559.1 |
| xanthine dehydrogenase family protein subunit m | SPO_RS04190 | Not Available | Negative | 865159 - 865986 | 28696.6 |
| lysr family transcriptional regulator | SPO_RS04195 | Q04778 | Positive | 866136 - 867017 | 32238.6 |
| nad(p)h-dependent oxidoreductase subunit e | SPO_RS04200 | Not Available | Positive | 867102 - 868805 | 61015.1 |
| formate dehydrogenase subunit alpha | SPO_RS04205 | P61159 | Positive | 868807 - 871584 | 100178.0 |
| cyclase family protein | SPO_RS04210 | Not Available | Positive | 871783 - 872559 | 28369.5 |
| thioesterase family protein | SPO_RS04215 | Not Available | Positive | 872581 - 873096 | 19020.6 |
| hypothetical protein | SPO_RS04220 | Not Available | Positive | 873304 - 874338 | 38508.9 |
| sugar transferase | SPO_RS04225 | Q46628 | Positive | 874893 - 875657 | 27944.1 |
| cpsd/capb family tyrosine-protein kinase | SPO_RS04230 | Not Available | Positive | 875744 - 876628 | 31156.9 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
