Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemin uptake protein hemp | SPO_RS22400 | Not Available | Positive | 821480 - 821647 | 6010.38 |
| hypothetical protein | SPO_RS03985 | Not Available | Positive | 821644 - 822087 | 15342.8 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | SPO_RS03990 | Q9VU95 | Negative | 822092 - 825148 | 111006.0 |
| nad(p)-dependent oxidoreductase | SPO_RS03995 | O33730 | Negative | 825264 - 826136 | 30305.0 |
| cu(i)-responsive transcriptional regulator | SPO_RS04000 | Q9X5V4 | Negative | 826232 - 826621 | 14462.3 |
| heavy metal translocating p-type atpase | SPO_RS04005 | P58342 | Negative | 826632 - 829118 | 84746.7 |
| sdr family oxidoreductase | SPO_RS04010 | Q8T197 | Negative | 829200 - 829955 | 26660.9 |
| sdr family oxidoreductase | SPO_RS04015 | Not Available | Negative | 829952 - 830875 | 33000.0 |
| bile acid:sodium symporter family protein | SPO_RS04020 | O34524 | Negative | 830872 - 831774 | 31821.1 |
| nad(p)/fad-dependent oxidoreductase | SPO_RS04025 | Q5REK0 | Negative | 831771 - 833087 | 49197.8 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
