Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribulose-phosphate 3-epimerase | SPO_RS03930 | P51012 | Negative | 812451 - 813140 | 24147.2 |
| phosphonate abc transporter atp-binding protein | SPO_RS03935 | Q5LVC2 | Positive | 813315 - 814136 | 29964.2 |
| phosphonate abc transporter substrate-binding protein | SPO_RS03940 | P16682 | Positive | 814198 - 815100 | 31816.9 |
| phosphonate abc transporter, permease protein phne | SPO_RS03945 | A0A140NFA3 | Positive | 815166 - 816047 | 31340.4 |
| phosphonate abc transporter, permease protein phne | SPO_RS03950 | Not Available | Positive | 816044 - 817414 | 50230.5 |
| chloramphenicol acetyltransferase | SPO_RS03955 | P50868 | Positive | 817436 - 818050 | 22724.5 |
| 2-dehydro-3-deoxygalactonokinase | SPO_RS03960 | Not Available | Positive | 818128 - 818982 | 29680.0 |
| thioesterase family protein | SPO_RS03965 | Not Available | Positive | 819039 - 819443 | 15045.8 |
| phosphoglycolate phosphatase | SPO_RS03970 | A3PNX3 | Negative | 819425 - 820081 | 22908.6 |
| mbl fold metallo-hydrolase | SPO_RS03980 | Not Available | Negative | 820376 - 821296 | 32961.9 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
