Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | SPO_RS00255 | P44658 | Positive | 50414 - 51349 | 33802.5 |
| thiaminase ii | SPO_RS00260 | P44659 | Positive | 51346 - 52026 | 24901.7 |
| abc transporter atp-binding protein | SPO_RS00265 | P44656 | Positive | 52023 - 52751 | 25479.9 |
| abc transporter permease | SPO_RS00270 | Q57306 | Positive | 52748 - 53482 | 26353.3 |
| dna repair protein radc | SPO_RS00275 | Q5LWK3 | Positive | 53549 - 54274 | 27282.0 |
| substrate-binding domain-containing protein | SPO_RS00280 | Not Available | Negative | 54337 - 55893 | 55868.5 |
| hypothetical protein | SPO_RS00285 | Not Available | Negative | 55919 - 56911 | 34760.1 |
| preprotein translocase subunit seca | SPO_RS00290 | Q5LWK0 | Negative | 57011 - 59716 | 100899.0 |
| peptidylprolyl isomerase | SPO_RS00295 | Q5L289 | Positive | 59891 - 60742 | 30440.1 |
| bifunctional glutamate n-acetyltransferase/amino-acid acetyltransferase argj | SPO_RS00300 | Q5LWL6 | Positive | 60750 - 61976 | 41932.1 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
