Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | SPO_RS03730 | Q6NYL3 | Negative | 768720 - 770765 | 72782.6 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase paag | SPO_RS03735 | P77467 | Positive | 770868 - 771653 | 27896.4 |
| hydroxyphenylacetyl-coa thioesterase paai | SPO_RS03740 | P76084 | Positive | 771656 - 772084 | 15293.9 |
| phenylacetate--coa ligase paak | SPO_RS03745 | Q9L9C1 | Positive | 772100 - 773410 | 48525.4 |
| tetr/acrr family transcriptional regulator | SPO_RS03750 | Not Available | Positive | 773414 - 774010 | 22291.7 |
| hypothetical protein | SPO_RS22755 | Not Available | Negative | 774969 - 776690 | 63532.2 |
| hypothetical protein | SPO_RS03760 | Not Available | Negative | 776691 - 778847 | 79228.2 |
| vanadium-dependent haloperoxidase | SPO_RS22125 | Not Available | Negative | 778867 - 779976 | 39100.2 |
| heme peroxidase family protein | SPO_RS03770 | Not Available | Positive | 780219 - 782021 | 65458.7 |
| hypothetical protein | SPO_RS03775 | Not Available | Negative | 782078 - 783019 | 33044.8 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
