Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdate abc transporter substrate-binding protein | SPO_RS03530 | Q8PHA1 | Negative | 727916 - 728665 | 26092.4 |
| winged helix-turn-helix domain-containing protein | SPO_RS03535 | Q08386 | Negative | 728731 - 729102 | 12975.7 |
| type i glyceraldehyde-3-phosphate dehydrogenase | SPO_RS03540 | Not Available | Negative | 729187 - 730212 | 36460.4 |
| abc transporter atp-binding protein | SPO_RS03545 | A5VU86 | Negative | 730360 - 731346 | 36084.4 |
| abc transporter atp-binding protein | SPO_RS03550 | Not Available | Negative | 731343 - 732338 | 35935.8 |
| abc transporter permease | SPO_RS03555 | P26904 | Negative | 732335 - 733459 | 41656.9 |
| abc transporter permease | SPO_RS03560 | Q8FWN8 | Negative | 733464 - 734468 | 36793.7 |
| abc transporter substrate-binding protein | SPO_RS03565 | Q9X4Y1 | Negative | 734529 - 736568 | 74558.2 |
| deor/glpr family dna-binding transcription regulator | SPO_RS03570 | P32144 | Negative | 736565 - 737440 | 31259.3 |
| fad-dependent oxidoreductase | SPO_RS03575 | Not Available | Positive | 737678 - 739048 | 50116.0 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
