Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp phosphoribosyltransferase | SPO_RS03380 | O08385 | Positive | 695503 - 696195 | 25065.0 |
| error-prone dna polymerase | SPO_RS03385 | Q5LVN0 | Negative | 696284 - 699589 | 122750.0 |
| dna polymerase y family protein | SPO_RS03390 | Q9A3J2 | Negative | 699586 - 701064 | 54996.4 |
| imua family protein | SPO_RS03395 | Not Available | Negative | 700979 - 701554 | 20437.7 |
| aspartate aminotransferase family protein | SPO_RS03400 | A1B9Z3 | Negative | 701700 - 703097 | 50855.7 |
| abc transporter substrate-binding protein | SPO_RS03405 | Not Available | Positive | 703495 - 704502 | 34865.4 |
| abc transporter atp-binding protein | SPO_RS03410 | Q5LVM5 | Positive | 704611 - 705417 | 29602.0 |
| abc transporter permease | SPO_RS03415 | Q47539 | Positive | 705423 - 706688 | 45315.6 |
| acyl-coa synthetase | SPO_RS03420 | Q8VZF1 | Positive | 706830 - 708458 | 59168.7 |
| agmatinase | SPO_RS03425 | Q7P0S6 | Negative | 708545 - 709504 | 34743.1 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
