Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | SPO_RS03330 | Q9F1R2 | Positive | 685170 - 686102 | 34063.0 |
| abc transporter substrate-binding protein | SPO_RS03335 | Not Available | Positive | 686222 - 687796 | 57812.4 |
| abc transporter permease | SPO_RS03340 | P42062 | Positive | 687864 - 688841 | 35133.1 |
| abc transporter permease | SPO_RS03345 | A0A0H2ZFV0 | Positive | 688838 - 689725 | 32157.8 |
| abc transporter atp-binding protein | SPO_RS03350 | Q577J5 | Positive | 689725 - 690714 | 35965.6 |
| abc transporter atp-binding protein | SPO_RS03355 | Not Available | Positive | 690715 - 691713 | 36505.2 |
| slyx family protein | SPO_RS03360 | Not Available | Negative | 691742 - 691936 | 7440.72 |
| crotonase/enoyl-coa hydratase family protein | SPO_RS03365 | O53561 | Positive | 692041 - 692844 | 27727.3 |
| histidine--trna ligase | SPO_RS03370 | Q5LVN3 | Positive | 692934 - 694421 | 53964.9 |
| atp phosphoribosyltransferase regulatory subunit | SPO_RS03375 | B3PRB0 | Positive | 694418 - 695506 | 39731.6 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
