Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cog3650 family protein | SPO_RS22085 | Not Available | Positive | 41301 - 41885 | 20689.9 |
| alpha-ketoglutarate-dependent dioxygenase alkb | SPO_RS00210 | P0CAT7 | Negative | 41882 - 42484 | 21685.4 |
| molecular chaperone dnak | SPO_RS00215 | Q5LWJ6 | Positive | 42698 - 44611 | 68442.1 |
| molecular chaperone dnaj | SPO_RS00220 | Q5LWJ5 | Positive | 44687 - 45832 | 40664.1 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | SPO_RS00225 | P56904 | Positive | 46122 - 46925 | 27230.3 |
| fad-dependent oxidoreductase | SPO_RS00230 | O34292 | Positive | 46922 - 47899 | 35907.2 |
| sulfur carrier protein this | SPO_RS00235 | Not Available | Positive | 47883 - 48077 | 6704.04 |
| thiazole synthase | SPO_RS00240 | Q5LWJ1 | Positive | 48081 - 48845 | 26956.6 |
| thiamine phosphate synthase | SPO_RS00245 | O34294 | Positive | 48842 - 49438 | 22090.6 |
| thif family adenylyltransferase | SPO_RS00250 | A4RPM5 | Positive | 49435 - 50400 | 33167.8 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
